Strain Fitness in Pseudomonas simiae WCS417 around PS417_12470

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,711,544	-		PS417_12465	0.56	-0.4
2,711,544	-		PS417_12465	0.56	+0.4
2,711,693	-		PS417_12465	0.67	+0.7
2,711,693	-		PS417_12465	0.67	-0.1
2,711,753	+		PS417_12465	0.71	-0.3
2,711,753	+		PS417_12465	0.71	-0.7
2,711,753	+		PS417_12465	0.71	-1.7
2,711,786	-		PS417_12465	0.74	+1.4
2,711,927	+		PS417_12465	0.84	-2.6
2,711,927	+		PS417_12465	0.84	-0.9
2,711,927	+		PS417_12465	0.84	+0.3
2,711,927	+		PS417_12465	0.84	+0.4
2,711,928	-		PS417_12465	0.85	+0.0
2,711,928	-		PS417_12465	0.85	+0.1
2,711,928	-		PS417_12465	0.85	+1.6
2,711,983	-		PS417_12465	0.89	-1.4
2,712,249	-				+2.8
2,712,249	-				+0.5
2,712,365	+				+1.7
2,712,465	+				+0.7
2,712,493	+		PS417_12470	0.19	+0.4
2,712,591	+		PS417_12470	0.27	-2.1
2,712,599	+		PS417_12470	0.27	-0.8
2,712,704	+		PS417_12470	0.36	+0.0
2,712,704	+		PS417_12470	0.36	-1.3
2,712,705	-		PS417_12470	0.36	+0.9
2,712,705	-		PS417_12470	0.36	+0.9
2,712,705	-		PS417_12470	0.36	-0.0
2,712,859	-		PS417_12470	0.47	+0.8
2,712,923	+		PS417_12470	0.52	-0.5
2,712,987	-		PS417_12470	0.57	+0.4
2,713,041	+		PS417_12470	0.61	-0.2
2,713,056	+		PS417_12470	0.63	+1.2
2,713,056	+		PS417_12470	0.63	+0.1
2,713,057	-		PS417_12470	0.63	-1.1
2,713,112	+		PS417_12470	0.67	+0.1
2,713,112	+		PS417_12470	0.67	+0.7
2,713,173	-		PS417_12470	0.72	+1.4
2,713,475	+				+1.3
2,713,475	+				-3.0
2,713,475	+				-0.6
2,713,500	+				-1.0
2,713,501	-				+0.1
2,713,501	-				-0.3
2,713,501	-				+0.4
2,713,523	-				+2.1
2,713,547	+				-0.9
2,713,589	+				-0.2
2,713,590	-				-3.2
2,713,743	-		PS417_12475	0.20	-0.2
2,713,778	+		PS417_12475	0.25	-1.8
2,713,938	+		PS417_12475	0.46	-0.3
2,713,938	+		PS417_12475	0.46	-2.7
2,713,938	+		PS417_12475	0.46	+1.9
2,713,939	-		PS417_12475	0.47	+0.2
2,713,939	-				-0.2
2,713,939	-		PS417_12475	0.47	-1.8
2,713,948	+		PS417_12475	0.48	+1.0
2,713,955	+		PS417_12475	0.49	-0.5
2,713,955	+		PS417_12475	0.49	-1.2
2,713,973	+		PS417_12475	0.51	-1.4
2,713,973	+		PS417_12475	0.51	-0.1
2,714,082	+		PS417_12475	0.66	-1.0
2,714,082	+		PS417_12475	0.66	+0.7
2,714,083	-		PS417_12475	0.66	+0.1
2,714,086	+		PS417_12475	0.66	+0.3
2,714,087	-		PS417_12475	0.66	+1.7
2,714,144	+		PS417_12475	0.74	-0.7
2,714,145	-		PS417_12475	0.74	+0.1
2,714,196	-		PS417_12475	0.81	+0.2
2,714,216	-		PS417_12475	0.84	-3.2
2,714,282	-				-0.3
2,714,282	-				+0.9
2,714,364	+				+0.3