Strain Fitness in Pseudomonas simiae WCS417 around PS417_11940

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,596,862	-		PS417_11935	0.18	+0.2
2,597,000	-		PS417_11935	0.32	-0.2
2,597,223	-		PS417_11935	0.53	+1.2
2,597,240	+		PS417_11935	0.55	-0.8
2,597,240	+		PS417_11935	0.55	+0.8
2,597,241	-		PS417_11935	0.55	-0.4
2,597,241	-		PS417_11935	0.55	+0.2
2,597,241	-		PS417_11935	0.55	-0.2
2,597,324	+		PS417_11935	0.63	-0.1
2,597,324	+		PS417_11935	0.63	-0.0
2,597,324	+		PS417_11935	0.63	+0.6
2,597,325	-		PS417_11935	0.64	+0.2
2,597,327	+		PS417_11935	0.64	+0.6
2,597,693	+				+0.3
2,597,694	-				-1.7
2,597,707	+				-0.4
2,597,708	-				+0.4
2,597,708	-				+0.1
2,597,708	-				-0.2
2,597,712	+				+1.3
2,597,713	-				+0.7
2,597,713	-				-1.0
2,597,713	-				-1.0
2,597,742	+				+0.3
2,597,788	+				+0.6
2,597,836	+				-1.6
2,597,836	+				+3.0
2,597,836	+				+2.2
2,597,836	+				-2.2
2,597,836	+				+0.1
2,597,836	+				+1.1
2,597,837	-				-0.3
2,597,840	-				-0.3
2,597,840	-				-0.7
2,597,869	+				-2.4
2,597,869	+				-0.8
2,597,927	+				+0.5
2,597,928	-				-1.6
2,597,956	+				-2.1
2,597,957	-				+1.6
2,597,992	+				+1.4
2,597,992	+				+0.5
2,597,993	-				-0.9
2,597,993	-				+1.7
2,598,176	+		PS417_11940	0.18	-2.0
2,598,258	-		PS417_11940	0.22	+2.6
2,598,258	-		PS417_11940	0.22	-2.3
2,598,439	+		PS417_11940	0.31	-1.1
2,598,440	-		PS417_11940	0.31	-0.0
2,598,448	+		PS417_11940	0.31	+1.3
2,598,449	-		PS417_11940	0.31	-0.7
2,598,449	-		PS417_11940	0.31	-2.3
2,598,475	+		PS417_11940	0.32	-2.0
2,598,475	+		PS417_11940	0.32	-1.6
2,598,475	+		PS417_11940	0.32	-0.8
2,598,475	+		PS417_11940	0.32	-0.9
2,598,709	+		PS417_11940	0.43	-0.0
2,598,727	+		PS417_11940	0.44	-0.7
2,598,727	+		PS417_11940	0.44	-1.0
2,598,728	-		PS417_11940	0.44	-0.5
2,598,728	-		PS417_11940	0.44	+1.0
2,598,728	-		PS417_11940	0.44	-0.1
2,598,796	+		PS417_11940	0.47	+0.0
2,598,898	+		PS417_11940	0.52	-0.3
2,598,937	+		PS417_11940	0.54	-0.4
2,598,938	-		PS417_11940	0.54	-2.6
2,599,063	+		PS417_11940	0.60	-1.5
2,599,085	-		PS417_11940	0.61	-0.1
2,599,085	-		PS417_11940	0.61	-0.5
2,599,085	-		PS417_11940	0.61	-1.0
2,599,277	-		PS417_11940	0.70	+0.4
2,599,280	+		PS417_11940	0.70	+0.5
2,599,280	+		PS417_11940	0.70	+0.0
2,599,281	-		PS417_11940	0.70	-2.6
2,599,281	-		PS417_11940	0.70	+0.7
2,599,281	-		PS417_11940	0.70	-1.5
2,599,316	-		PS417_11940	0.72	-1.2
2,599,384	+		PS417_11940	0.75	-1.7
2,599,385	-		PS417_11940	0.75	-0.8
2,599,393	+		PS417_11940	0.76	-0.6
2,599,447	+		PS417_11940	0.78	+1.1
2,599,448	-		PS417_11940	0.78	-1.2
2,599,523	-		PS417_11940	0.82	-0.6
2,599,902	+				+0.1
2,599,961	+				-0.1
2,599,962	-				-0.7
2,599,962	-				-0.7
2,600,317	+		PS417_11945	0.79	+0.8
2,600,352	+		PS417_11945	0.88	-1.1
2,600,352	+		PS417_11945	0.88	+0.2
2,600,530	+				-0.8
2,600,531	-				+0.2
2,600,531	-				+0.1
2,600,724	-		PS417_11950	0.53	-0.6