Strain Fitness in Pseudomonas simiae WCS417 around PS417_11890

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,588,353	+		PS417_11885	0.13	-1.9
2,588,665	+		PS417_11885	0.47	+1.0
2,588,666	-		PS417_11885	0.47	-1.2
2,588,666	-		PS417_11885	0.47	-0.5
2,588,666	-		PS417_11885	0.47	+1.9
2,588,745	+		PS417_11885	0.55	+0.4
2,589,157	+				-1.1
2,589,178	-				-0.6
2,589,216	+				-0.3
2,589,216	+				+0.5
2,589,216	+				-0.5
2,589,217	-				+1.0
2,589,224	+				-0.3
2,589,288	+				-1.1
2,589,288	+				+0.1
2,589,289	-				-1.0
2,589,289	-				-1.5
2,589,442	-		PS417_11890	0.14	-0.5
2,589,867	+		PS417_11890	0.41	+0.7
2,589,867	+		PS417_11890	0.41	-0.4
2,589,867	+		PS417_11890	0.41	+0.2
2,589,868	-		PS417_11890	0.41	-0.5
2,589,936	+		PS417_11890	0.46	+0.5
2,589,936	+		PS417_11890	0.46	-0.1
2,590,084	+		PS417_11890	0.55	+0.7
2,590,359	+		PS417_11890	0.73	+0.4
2,590,584	+				-2.2
2,590,781	+				+1.7
2,590,781	+				-0.3
2,590,782	-				-0.5
2,590,788	+				+0.6
2,590,789	-				+0.3
2,590,805	-				-1.5
2,590,816	-				-0.7
2,590,822	+				+0.1
2,591,300	+		PS417_11895	0.48	-0.7
2,591,300	+		PS417_11895	0.48	-2.7
2,591,300	+		PS417_11895	0.48	+0.1
2,591,301	-		PS417_11895	0.48	-0.3
2,591,339	+		PS417_11895	0.52	+0.9
2,591,404	+		PS417_11895	0.59	+0.3
2,591,435	+		PS417_11895	0.62	-0.2
2,591,436	-		PS417_11895	0.62	-0.2
2,591,436	-		PS417_11895	0.62	-0.0
2,591,436	-		PS417_11895	0.62	+0.8
2,591,436	-		PS417_11895	0.62	-0.3
2,591,436	-		PS417_11895	0.62	-0.1
2,591,441	+		PS417_11895	0.62	-0.5
2,591,441	+		PS417_11895	0.62	-0.4
2,591,441	+		PS417_11895	0.62	+2.9
2,591,442	-		PS417_11895	0.62	-1.0
2,591,442	-		PS417_11895	0.62	-0.6
2,591,442	-		PS417_11895	0.62	-1.9
2,591,513	+		PS417_11895	0.69	-0.4
2,591,514	-		PS417_11895	0.69	-0.3
2,591,741	+				-0.4
2,591,742	-				-1.1
2,591,742	-				+0.0