Strain Fitness in Pseudomonas simiae WCS417 around PS417_11650

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,506,727	+		PS417_11645	0.78	-2.6
2,507,075	+				+0.0
2,507,075	+				+0.6
2,507,075	+				-0.6
2,507,124	+				+3.5
2,507,149	+				-0.3
2,507,180	-				+0.3
2,507,183	+				-1.3
2,507,184	-				-0.4
2,507,188	-				-0.5
2,507,188	-				-1.0
2,507,238	+				-0.1
2,507,238	+				+0.7
2,507,239	-				-1.2
2,507,239	-				+1.8
2,507,253	-				-1.6
2,507,253	-				-0.4
2,507,532	+		PS417_11650	0.17	+0.3
2,507,533	-		PS417_11650	0.17	+0.2
2,507,533	-		PS417_11650	0.17	-0.9
2,507,741	+		PS417_11650	0.34	-0.4
2,508,040	-		PS417_11650	0.58	-1.3
2,508,040	-		PS417_11650	0.58	+1.1
2,508,040	-		PS417_11650	0.58	-0.8
2,508,177	+		PS417_11650	0.70	-0.4
2,508,234	+		PS417_11650	0.74	-1.8
2,508,235	-		PS417_11650	0.74	+0.4
2,508,333	+		PS417_11650	0.82	-2.2
2,508,564	-				+0.8
2,508,569	+				+0.6
2,508,569	+				+1.6
2,508,900	-				-0.1
2,508,915	+				-0.4
2,508,915	+				+0.3
2,508,961	-				-0.4
2,508,974	+				-0.6
2,508,975	-				-2.0
2,509,094	+		PS417_11660	0.17	-1.6
2,509,263	-		PS417_11660	0.33	-2.0
2,509,263	-		PS417_11660	0.33	-1.3
2,509,367	+		PS417_11660	0.43	-1.2
2,509,368	-		PS417_11660	0.43	+0.0
2,509,368	-		PS417_11660	0.43	+0.6
2,509,490	+		PS417_11660	0.55	-0.7
2,509,491	-		PS417_11660	0.55	-0.1
2,509,493	-				-1.4
2,509,493	-		PS417_11660	0.55	-2.6
2,509,497	-		PS417_11660	0.56	-0.6
2,509,549	+		PS417_11660	0.61	-0.1