Strain Fitness in Pseudomonas simiae WCS417 around PS417_11500

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,472,441	+		PS417_11495	0.30	+0.2
2,472,686	-		PS417_11495	0.56	-0.0
2,472,873	+		PS417_11495	0.75	-0.4
2,472,874	-		PS417_11495	0.75	+0.1
2,472,874	-		PS417_11495	0.75	+1.2
2,472,877	+				-1.2
2,472,877	+		PS417_11495	0.76	+0.1
2,472,877	+		PS417_11495	0.76	+0.6
2,472,877	+		PS417_11495	0.76	-0.4
2,472,877	+		PS417_11495	0.76	-0.4
2,472,877	+		PS417_11495	0.76	-0.1
2,472,877	+		PS417_11495	0.76	+0.5
2,472,877	+		PS417_11495	0.76	-0.0
2,472,878	-		PS417_11495	0.76	+0.5
2,472,942	+		PS417_11495	0.82	-0.8
2,472,943	-		PS417_11495	0.83	-0.8
2,473,060	-				+0.8
2,473,060	-				+1.0
2,473,060	-				+0.7
2,473,363	+		PS417_11500	0.24	-0.8
2,473,363	+		PS417_11500	0.24	-0.1
2,473,363	+		PS417_11500	0.24	-1.3
2,473,364	-		PS417_11500	0.24	-3.0
2,473,364	-		PS417_11500	0.24	-3.8
2,473,364	-		PS417_11500	0.24	-1.1
2,473,834	+		PS417_11500	0.69	-0.1
2,474,149	+				-0.9
2,474,150	-				+1.2
2,474,188	-				-0.0
2,474,278	-		PS417_11505	0.12	-0.8
2,474,412	+		PS417_11505	0.26	+0.2
2,474,457	+		PS417_11505	0.31	-1.1
2,474,457	+		PS417_11505	0.31	-1.2
2,474,458	-		PS417_11505	0.31	+0.2
2,474,634	+		PS417_11505	0.50	+1.0
2,474,655	+		PS417_11505	0.52	-0.4
2,474,714	-				+1.0
2,474,770	+		PS417_11505	0.64	-0.5
2,474,808	+		PS417_11505	0.68	-1.9
2,474,845	-		PS417_11505	0.72	-2.0
2,474,859	+		PS417_11505	0.74	+1.2
2,474,859	+				+0.6
2,474,890	+		PS417_11505	0.77	-1.2
2,474,906	+		PS417_11505	0.78	+0.3
2,474,943	+		PS417_11505	0.82	-0.7
2,474,943	+		PS417_11505	0.82	-0.5
2,474,943	+		PS417_11505	0.82	-0.2