Strain Fitness in Pseudomonas simiae WCS417 around PS417_11210
Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | R2A with Polymyxin B sulfate 0.002 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,403,199 | - | -1.9 | |||
| 2,403,729 | - | PS417_11205 | 0.58 | +2.7 | |
| 2,404,271 | + | PS417_11210 | 0.19 | -0.4 | |
| 2,404,931 | + | PS417_11215 | 0.36 | -2.4 | |
| 2,404,993 | + | PS417_11215 | 0.43 | +1.1 | |
| 2,405,065 | - | PS417_11215 | 0.52 | +1.2 | |
| 2,405,149 | - | PS417_11215 | 0.62 | +1.3 | |
| 2,405,251 | - | PS417_11215 | 0.75 | -0.2 | |
| 2,405,251 | - | PS417_11215 | 0.75 | -0.4 | |
| 2,405,422 | - | -1.9 | |||
| 2,405,422 | - | +0.3 | |||
| 2,405,497 | + | -0.3 | |||
| 2,405,526 | - | +1.6 | |||
| 2,405,578 | - | +0.2 |
Or see this region's nucleotide sequence