Strain Fitness in Pseudomonas simiae WCS417 around PS417_09770

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,115,946	+				+0.7
2,115,946	+				+1.1
2,115,995	+				+2.5
2,115,995	+				-0.3
2,115,998	-				+0.9
2,116,053	-				+1.8
2,116,359	+		PS417_09765	0.43	+0.9
2,116,592	+		PS417_09765	0.68	-1.1
2,116,713	+		PS417_09765	0.82	+0.5
2,116,713	+		PS417_09765	0.82	+0.1
2,116,713	+				-0.6
2,116,714	-		PS417_09765	0.82	-0.1
2,116,714	-		PS417_09765	0.82	+0.4
2,116,715	+		PS417_09765	0.82	+0.4
2,116,715	+		PS417_09765	0.82	+0.5
2,116,715	+		PS417_09765	0.82	-0.1
2,116,715	+		PS417_09765	0.82	-0.6
2,116,716	-		PS417_09765	0.82	-1.3
2,116,716	-				-1.3
2,116,716	-		PS417_09765	0.82	+0.2
2,116,716	-		PS417_09765	0.82	+0.1
2,116,769	+		PS417_09765	0.88	-1.7
2,116,770	-		PS417_09765	0.88	-0.6
2,116,770	-		PS417_09765	0.88	+0.1
2,116,770	-		PS417_09765	0.88	+0.4
2,116,771	+		PS417_09765	0.88	-2.2
2,116,772	-		PS417_09765	0.88	-0.3
2,116,785	-		PS417_09765	0.90	+0.3
2,116,877	+				-0.2
2,116,878	-				+0.6
2,116,883	-				+0.1
2,117,135	+		PS417_09770	0.17	-0.6
2,117,137	+		PS417_09770	0.17	+0.9
2,117,138	-		PS417_09770	0.17	+1.2
2,117,138	-				+1.2
2,117,172	+		PS417_09770	0.20	+1.0
2,117,231	+		PS417_09770	0.25	-0.1
2,117,231	+		PS417_09770	0.25	+0.7
2,117,360	-		PS417_09770	0.37	+0.3
2,117,360	-		PS417_09770	0.37	+1.6
2,117,360	-		PS417_09770	0.37	-0.8
2,117,723	+		PS417_09770	0.68	-0.1
2,117,972	-				+0.7
2,118,114	-				+0.1
2,118,284	-				-1.3
2,118,329	-				+0.1
2,118,594	+				-0.4
2,118,594	+				-2.8
2,118,595	-				+1.9
2,118,599	-				-0.2
2,118,599	-				+1.3
2,118,599	-				-0.9
2,118,599	-				-0.4
2,118,714	+		PS417_09775	0.15	+0.6
2,118,714	+		PS417_09775	0.15	+0.9
2,118,714	+		PS417_09775	0.15	-2.4
2,118,715	-		PS417_09775	0.15	-1.8
2,118,715	-				+2.1
2,118,715	-		PS417_09775	0.15	+0.2
2,118,947	+		PS417_09775	0.39	+0.4