Strain Fitness in Pseudomonas simiae WCS417 around PS417_07990

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,747,187	-		PS417_07980	0.15	-1.9
1,747,187	-		PS417_07980	0.15	-0.1
1,747,225	+		PS417_07980	0.24	-0.9
1,747,225	+		PS417_07980	0.24	+0.4
1,747,225	+		PS417_07980	0.24	+0.1
1,747,509	-				-3.1
1,747,636	+		PS417_07985	0.45	-1.7
1,747,834	+				-1.4
1,747,855	+				+1.7
1,747,856	-				-0.8
1,747,869	+				+0.1
1,747,869	+				+0.4
1,747,869	+				+0.5
1,747,924	+				-0.6
1,747,924	+				-0.2
1,747,924	+				-0.8
1,747,925	-				+0.8
1,747,931	+				-0.6
1,747,932	-				+0.7
1,747,932	-				-1.3
1,747,932	-				-0.7
1,747,932	-				-1.2
1,748,026	-		PS417_07990	0.24	+1.7
1,748,119	+		PS417_07990	0.48	+1.3
1,748,120	-		PS417_07990	0.48	+1.4
1,748,169	+		PS417_07990	0.60	-0.6
1,748,169	+		PS417_07990	0.60	+1.1
1,748,169	+		PS417_07990	0.60	-3.3
1,748,169	+		PS417_07990	0.60	+0.1
1,748,169	+		PS417_07990	0.60	-0.6
1,748,170	-		PS417_07990	0.61	-0.5
1,748,354	+				-0.0
1,748,354	+				-1.1
1,748,354	+				-0.2
1,748,355	-				+2.6
1,748,404	+				-1.6
1,748,405	-				+0.7
1,748,494	+		PS417_07995	0.12	+0.3
1,748,494	+		PS417_07995	0.12	-0.2
1,748,495	-		PS417_07995	0.12	+0.1
1,749,197	+		PS417_07995	0.63	+0.9
1,749,197	+		PS417_07995	0.63	+0.6
1,749,197	+		PS417_07995	0.63	+0.1
1,749,198	-		PS417_07995	0.63	-0.6
1,749,198	-		PS417_07995	0.63	+0.2
1,749,198	-		PS417_07995	0.63	+0.9
1,749,203	+		PS417_07995	0.64	-0.7
1,749,204	-		PS417_07995	0.64	-1.8
1,749,269	-		PS417_07995	0.69	+0.0
1,749,302	+		PS417_07995	0.71	+0.1
1,749,302	+		PS417_07995	0.71	-1.3
1,749,303	-		PS417_07995	0.71	+1.3
1,749,303	-		PS417_07995	0.71	+0.2
1,749,303	-		PS417_07995	0.71	-0.3
1,749,303	-		PS417_07995	0.71	-0.2
1,749,303	-		PS417_07995	0.71	-0.8