Strain Fitness in Pseudomonas simiae WCS417 around PS417_07505

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,648,168	+		PS417_07500	0.24	+0.2
1,648,168	+		PS417_07500	0.24	-0.5
1,648,169	-		PS417_07500	0.24	-0.6
1,648,169	-		PS417_07500	0.24	+0.8
1,648,169	-		PS417_07500	0.24	+1.2
1,648,463	+		PS417_07500	0.51	+2.7
1,648,464	-		PS417_07500	0.51	+0.0
1,648,611	+		PS417_07500	0.65	+0.1
1,648,671	+		PS417_07500	0.71	+0.3
1,648,889	+				-2.4
1,648,889	+				-1.8
1,648,890	-				-2.6
1,648,890	-				-0.6
1,648,904	+				+1.0
1,649,071	+				+0.7
1,649,102	+				+1.9
1,649,103	-				-0.1
1,649,233	+		PS417_07505	0.12	+0.3
1,649,374	+		PS417_07505	0.27	+0.1
1,649,377	-		PS417_07505	0.27	-0.3
1,649,377	-		PS417_07505	0.27	-1.6
1,649,530	+		PS417_07505	0.43	-1.4
1,649,531	-		PS417_07505	0.43	+0.0
1,649,680	+		PS417_07505	0.58	+0.8
1,649,680	+		PS417_07505	0.58	-0.4
1,649,681	-		PS417_07505	0.58	-0.2
1,649,681	-		PS417_07505	0.58	-1.5
1,649,681	-		PS417_07505	0.58	-0.9
1,649,683	-		PS417_07505	0.58	-0.3
1,649,683	-				+0.7
1,650,002	+				+0.8
1,650,032	-				+0.0
1,650,179	-				+1.6
1,650,257	+				+1.4
1,650,257	+				+1.9
1,650,257	+				+1.7
1,650,257	+				+1.4
1,650,258	-				+2.5
1,650,258	-				+2.0
1,650,377	+		PS417_07510	0.19	+0.7
1,650,470	+		PS417_07510	0.29	+2.4
1,650,542	+		PS417_07510	0.37	-0.2
1,650,543	-		PS417_07510	0.37	+1.7
1,650,543	-		PS417_07510	0.37	+1.6
1,650,748	+		PS417_07510	0.59	+0.9
1,650,771	-		PS417_07510	0.61	+1.1
1,650,812	+				+1.7
1,650,992	+		PS417_07510	0.85	+1.4
1,650,992	+		PS417_07510	0.85	+0.6