Strain Fitness in Pseudomonas simiae WCS417 around PS417_07490

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,645,147	-				+0.6
1,645,213	-				-1.5
1,645,224	+				-2.0
1,645,224	+				-1.5
1,645,225	-				+0.6
1,645,225	-				+0.0
1,645,225	-				+0.5
1,645,252	+				+0.8
1,645,252	+				+0.1
1,645,480	-		PS417_07485	0.51	-0.2
1,645,480	-		PS417_07485	0.51	-0.4
1,645,489	+		PS417_07485	0.52	-0.5
1,645,511	+		PS417_07485	0.56	+0.9
1,645,577	+		PS417_07485	0.69	+1.7
1,645,577	+		PS417_07485	0.69	+2.7
1,645,578	-		PS417_07485	0.69	+0.5
1,645,578	-		PS417_07485	0.69	+0.4
1,645,578	-		PS417_07485	0.69	-2.1
1,645,578	-		PS417_07485	0.69	+1.7
1,645,578	-		PS417_07485	0.69	-0.2
1,645,578	-		PS417_07485	0.69	+0.4
1,645,599	+		PS417_07485	0.73	+1.4
1,645,599	+		PS417_07485	0.73	-1.6
1,645,600	-		PS417_07485	0.73	-2.5
1,645,600	-		PS417_07485	0.73	-1.3
1,645,840	-				-0.8
1,645,885	+				+0.6
1,645,885	+				+0.7
1,645,885	+				-0.3
1,645,886	-				+0.2
1,645,888	-				-0.4
1,645,935	+		PS417_07490	0.13	+0.6
1,645,935	+		PS417_07490	0.13	-0.4
1,645,935	+		PS417_07490	0.13	+0.8
1,645,935	+		PS417_07490	0.13	+1.5
1,645,935	+		PS417_07490	0.13	+0.1
1,645,965	+		PS417_07490	0.15	+0.4
1,645,965	+		PS417_07490	0.15	-2.3
1,645,965	+		PS417_07490	0.15	+1.7
1,645,965	+		PS417_07490	0.15	-0.1
1,645,965	+		PS417_07490	0.15	+0.4
1,646,070	+		PS417_07490	0.24	+0.5
1,646,071	-		PS417_07490	0.24	-0.9
1,646,071	-		PS417_07490	0.24	-0.2
1,646,071	-		PS417_07490	0.24	-0.1
1,646,142	+		PS417_07490	0.30	-1.1
1,646,161	-		PS417_07490	0.32	+2.1
1,646,166	+		PS417_07490	0.32	+0.3
1,646,167	-		PS417_07490	0.32	+0.3
1,646,302	+		PS417_07490	0.44	-0.4
1,646,302	+		PS417_07490	0.44	+0.3
1,646,455	-		PS417_07490	0.57	+0.9
1,646,845	-		PS417_07490	0.90	-1.5
1,646,845	-		PS417_07490	0.90	+0.4
1,647,178	+		PS417_07495	0.25	+2.3
1,647,179	-		PS417_07495	0.25	-0.1
1,647,284	+		PS417_07495	0.38	+0.3
1,647,285	-		PS417_07495	0.38	+1.0
1,647,343	-		PS417_07495	0.45	-0.1
1,647,393	-		PS417_07495	0.51	-0.7
1,647,398	+		PS417_07495	0.51	-0.9
1,647,398	+		PS417_07495	0.51	-0.5
1,647,399	-		PS417_07495	0.51	+0.6
1,647,399	-		PS417_07495	0.51	+0.3
1,647,530	+		PS417_07495	0.67	-0.3
1,647,531	-		PS417_07495	0.67	-0.5
1,647,603	-		PS417_07495	0.75	+2.1
1,647,785	+				+0.2
1,647,785	+				-0.8
1,647,785	+				-1.7
1,647,785	+				-1.5
1,647,785	+				-0.0
1,647,786	-				-0.0
1,647,786	-				-0.3
1,647,786	-				-0.2
1,647,843	+				-0.3
1,647,844	-				+0.2
1,647,844	-				+0.1
1,647,844	-				-0.1
1,647,883	-				+0.9
1,647,939	-				+0.2