Strain Fitness in Pseudomonas simiae WCS417 around PS417_07340

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,617,606	+		PS417_07335	0.54	-2.0
1,617,606	+		PS417_07335	0.54	-1.0
1,617,606	+		PS417_07335	0.54	+1.0
1,617,745	+				+1.9
1,617,782	-		PS417_07335	0.66	-1.2
1,618,294	+				-0.1
1,618,295	-				-0.5
1,618,356	+				+0.1
1,618,360	-				-0.2
1,618,367	+				-0.3
1,618,367	+				-1.5
1,618,368	-				-3.1
1,618,412	+				+0.4
1,618,412	+				-0.3
1,618,428	-				+0.4
1,618,428	-				-1.7
1,618,430	+				+0.7
1,618,439	+				+0.3
1,618,440	-				-0.8
1,618,440	-				-1.3
1,618,442	+				-0.6
1,618,479	+				+0.8
1,618,481	+				+0.1
1,618,481	+				-0.6
1,618,481	+				+1.5
1,618,481	+				+0.9
1,618,481	+				+2.7
1,618,481	+				-0.3
1,618,481	+				+0.4
1,618,481	+				-0.1
1,618,481	+				+0.3
1,618,482	-				+0.1
1,618,482	-				+0.0
1,618,482	-				-0.5
1,618,482	-				-0.5
1,618,482	-				+0.3
1,618,482	-				-0.6
1,618,482	-				-1.5
1,618,482	-				-0.4
1,618,529	+		PS417_07340	0.12	+0.4
1,618,529	+				+1.7
1,618,530	-		PS417_07340	0.12	+1.3
1,618,535	+		PS417_07340	0.13	-2.7
1,618,535	+		PS417_07340	0.13	-0.2
1,618,536	-		PS417_07340	0.13	-1.6
1,618,658	+		PS417_07340	0.27	-0.7
1,618,659	-		PS417_07340	0.27	+1.2
1,618,659	-		PS417_07340	0.27	-0.6
1,618,659	-		PS417_07340	0.27	-0.8
1,618,659	-		PS417_07340	0.27	-0.0
1,618,691	+		PS417_07340	0.31	-0.7
1,618,691	+		PS417_07340	0.31	+0.0
1,618,691	+		PS417_07340	0.31	+0.1
1,618,826	+		PS417_07340	0.47	-0.1
1,618,827	-		PS417_07340	0.47	-2.5
1,618,827	-		PS417_07340	0.47	-1.1
1,618,862	+		PS417_07340	0.52	-0.3
1,619,076	-		PS417_07340	0.77	+0.0
1,619,076	-		PS417_07340	0.77	-0.4
1,619,144	+		PS417_07340	0.85	-0.5
1,619,145	-		PS417_07340	0.85	-1.0
1,619,147	+		PS417_07340	0.85	-0.2
1,619,260	+				-0.8
1,619,261	-				-0.1
1,619,261	-				-0.2
1,619,261	-				+0.3
1,619,345	+				-0.4
1,619,345	+				-0.0
1,619,346	-				+0.2
1,619,510	+		PS417_07345	0.40	-1.3
1,619,913	-		PS417_07350	0.14	+0.7
1,619,913	-		PS417_07350	0.14	-0.9