Strain Fitness in Pseudomonas simiae WCS417 around PS417_06525

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,445,056	+		PS417_06515	0.66	-0.7
1,445,057	-		PS417_06515	0.66	+2.2
1,445,185	+		PS417_06515	0.72	+2.0
1,445,212	+		PS417_06515	0.73	-0.3
1,445,264	+		PS417_06515	0.75	-0.7
1,445,265	-		PS417_06515	0.75	+0.9
1,445,268	-		PS417_06515	0.75	+1.4
1,445,321	-		PS417_06515	0.78	+2.1
1,445,343	+		PS417_06515	0.79	-1.1
1,445,343	+		PS417_06515	0.79	+0.1
1,445,344	-		PS417_06515	0.79	+0.9
1,445,344	-		PS417_06515	0.79	+1.1
1,445,347	+		PS417_06515	0.79	+0.5
1,445,347	+		PS417_06515	0.79	-0.0
1,445,347	+		PS417_06515	0.79	-1.7
1,445,348	-		PS417_06515	0.79	+1.9
1,445,348	-		PS417_06515	0.79	+0.9
1,445,348	-				+2.0
1,445,348	-		PS417_06515	0.79	+0.4
1,445,348	-		PS417_06515	0.79	+0.8
1,445,935	-				+1.1
1,445,957	-				+0.2
1,446,198	+		PS417_06525	0.25	-0.0
1,446,199	-		PS417_06525	0.25	-1.0
1,446,199	-		PS417_06525	0.25	+1.5
1,446,536	+		PS417_06525	0.54	-0.4
1,446,536	+		PS417_06525	0.54	-1.6
1,446,536	+		PS417_06525	0.54	-1.2
1,446,537	-		PS417_06525	0.54	+1.2
1,446,537	-		PS417_06525	0.54	+1.5
1,446,537	-		PS417_06525	0.54	+1.1
1,446,539	-		PS417_06525	0.54	+0.4
1,446,584	-		PS417_06525	0.58	+1.4
1,446,593	-		PS417_06525	0.59	+1.2
1,446,593	-		PS417_06525	0.59	+1.1
1,446,663	-		PS417_06525	0.65	+0.7
1,446,665	+		PS417_06525	0.65	-0.9
1,446,666	-		PS417_06525	0.65	+1.0
1,446,738	+		PS417_06525	0.72	+0.8
1,446,738	+		PS417_06525	0.72	-1.0
1,446,758	+				-1.0
1,446,758	+		PS417_06525	0.73	-1.0
1,446,758	+		PS417_06525	0.73	+0.6
1,446,968	-				-0.1
1,446,968	-				-0.1
1,446,990	-				-0.8
1,447,002	+				-1.5
1,447,002	+				-1.4
1,447,006	+				+2.2
1,447,006	+				-0.1
1,447,006	+				-3.4
1,447,007	-				-0.2
1,447,011	-				+1.5
1,447,011	-				+1.0
1,447,102	-				-1.1
1,447,103	+				-0.4
1,447,103	+				+0.3
1,447,199	+				+0.2
1,447,236	+				+0.4
1,447,246	+				-0.5
1,447,392	+		PS417_06530	0.16	+1.8
1,447,685	+		PS417_06530	0.42	+0.4
1,447,781	+		PS417_06530	0.50	+2.0
1,447,781	+		PS417_06530	0.50	+0.6