Strain Fitness in Pseudomonas simiae WCS417 around PS417_05380

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,197,031	-				+0.9
1,197,176	+				-1.8
1,197,177	-				-4.4
1,197,177	-				+0.1
1,197,597	+				-0.8
1,197,597	+				-0.2
1,197,598	-				-0.1
1,197,740	+				-0.9
1,197,741	-				+0.9
1,197,769	-				-3.4
1,197,803	+				+0.3
1,197,804	-				-0.3
1,197,996	+				-0.7
1,198,019	-		PS417_05380	0.11	-1.6
1,198,054	+		PS417_05380	0.13	-0.2
1,198,055	-		PS417_05380	0.13	-1.3
1,198,055	-		PS417_05380	0.13	-1.8
1,198,060	+		PS417_05380	0.13	-0.8
1,198,061	-		PS417_05380	0.13	-3.0
1,198,117	+		PS417_05380	0.17	-1.2
1,198,117	+		PS417_05380	0.17	+1.2
1,198,162	+		PS417_05380	0.20	+0.6
1,198,162	+		PS417_05380	0.20	-0.0
1,198,163	-		PS417_05380	0.20	-1.7
1,198,425	+		PS417_05380	0.37	-0.3
1,198,525	+		PS417_05380	0.44	-1.2
1,198,745	-		PS417_05380	0.58	+0.5
1,199,221	+		PS417_05380	0.89	-0.3
1,199,222	-		PS417_05380	0.89	-0.5
1,199,332	+				+0.5
1,199,547	+				+0.2
1,200,366	+		PS417_05385	0.36	+0.9
1,200,367	-		PS417_05385	0.36	+0.3
1,200,367	-		PS417_05385	0.36	+1.5
1,200,367	-		PS417_05385	0.36	-1.0