Strain Fitness in Pseudomonas simiae WCS417 around PS417_24470

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,310,976	+				-1.2
5,310,988	+				-1.5
5,311,009	-				-0.5
5,311,015	-				-0.8
5,311,015	-				+0.1
5,311,015	-				-0.1
5,311,017	+				+0.7
5,311,018	-				-1.3
5,311,018	-				-0.8
5,311,018	-				+0.1
5,311,018	-				-0.2
5,311,078	+				-1.1
5,311,401	+		PS417_24465	0.37	-1.1
5,311,401	+		PS417_24465	0.37	+0.1
5,311,401	+		PS417_24465	0.37	-0.2
5,311,402	-		PS417_24465	0.37	+1.3
5,311,506	+		PS417_24465	0.49	+0.8
5,311,506	+		PS417_24465	0.49	-0.6
5,311,507	-		PS417_24465	0.49	+0.3
5,311,575	+		PS417_24465	0.56	+1.5
5,311,959	+				+0.2
5,311,960	-				+1.6
5,311,960	-				-1.0
5,312,032	+				+0.5
5,312,173	-		PS417_24470	0.22	+0.7
5,312,173	-		PS417_24470	0.22	+3.7
5,312,405	-		PS417_24470	0.46	+1.1
5,312,527	-		PS417_24470	0.58	-0.4
5,312,527	-		PS417_24470	0.58	-1.6
5,312,556	+		PS417_24470	0.61	-1.4
5,312,557	-		PS417_24470	0.61	+0.4
5,312,557	-		PS417_24470	0.61	-0.3
5,312,557	-		PS417_24470	0.61	+0.1
5,312,685	+		PS417_24470	0.74	-0.3
5,312,685	+		PS417_24470	0.74	+2.2
5,312,686	-		PS417_24470	0.74	-1.0
5,312,686	-		PS417_24470	0.74	-2.1
5,312,686	-		PS417_24470	0.74	-1.3
5,312,686	-		PS417_24470	0.74	+0.0
5,312,686	-		PS417_24470	0.74	+1.2
5,312,686	-		PS417_24470	0.74	-0.3
5,312,686	-		PS417_24470	0.74	-0.6
5,312,686	-		PS417_24470	0.74	+0.5
5,312,686	-		PS417_24470	0.74	-0.5
5,312,707	-		PS417_24470	0.77	-0.4
5,312,707	-		PS417_24470	0.77	-1.8
5,312,808	+		PS417_24470	0.87	-0.7
5,312,808	+				-1.1
5,312,809	-		PS417_24470	0.87	-1.4
5,312,809	-		PS417_24470	0.87	+0.1
5,312,817	+		PS417_24470	0.88	+0.9
5,312,897	+				+0.1
5,312,897	+				+0.0
5,312,898	-				-1.4
5,312,920	+				+0.2
5,312,921	-				+0.2
5,312,921	-				+0.9
5,312,921	-				-0.1
5,312,983	+				+0.3
5,312,983	+				+0.8
5,312,983	+				+0.1
5,313,552	+				-0.7
5,313,553	-				-0.6
5,313,639	+				-1.7
5,313,640	-				-0.5
5,313,697	-		PS417_24480	0.15	+0.4
5,313,766	+		PS417_24480	0.23	-0.4
5,313,767	-		PS417_24480	0.23	+1.7
5,313,847	-		PS417_24480	0.32	-0.8
5,313,847	-				+2.2
5,313,900	+		PS417_24480	0.38	+0.8
5,313,901	-		PS417_24480	0.39	+1.4
5,313,901	-		PS417_24480	0.39	+1.4
5,313,901	-		PS417_24480	0.39	+0.8