Strain Fitness in Pseudomonas simiae WCS417 around PS417_16290

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,568,325	+		PS417_16285	0.81	+1.9
3,568,325	+		PS417_16285	0.81	+1.1
3,568,326	-		PS417_16285	0.81	+0.0
3,568,338	-		PS417_16285	0.82	-0.4
3,568,431	+				-0.9
3,568,463	-				-0.7
3,568,463	-				-0.1
3,568,489	+				-0.1
3,568,489	+				+0.4
3,568,489	+				-0.3
3,568,518	-				-0.1
3,568,636	+				+0.2
3,568,637	-				+1.1
3,568,662	+				-0.5
3,568,663	-				-0.1
3,568,776	-				+1.3
3,568,848	+				+0.1
3,568,866	-				+0.1
3,568,866	-				+1.4
3,568,908	-				-1.9
3,568,909	-				+2.7
3,568,943	+				-0.3
3,568,954	+				-0.5
3,569,013	-				+1.2
3,569,074	+				+1.1
3,569,090	+				+0.6
3,569,090	+				+0.9
3,569,091	-				-0.9
3,569,125	-				-0.3
3,569,125	-				-0.2
3,569,304	+				-0.6
3,569,307	+				-0.2
3,569,307	+				+0.2
3,569,308	-				-0.5
3,569,336	+		PS417_16290	0.11	+0.2
3,569,387	+		PS417_16290	0.25	+0.9
3,569,404	-		PS417_16290	0.29	-0.6
3,569,404	-		PS417_16290	0.29	-0.1
3,569,519	+				+3.3
3,569,519	+		PS417_16290	0.59	-0.5
3,569,520	-		PS417_16290	0.59	-0.4
3,569,520	-		PS417_16290	0.59	-0.9
3,569,535	-		PS417_16290	0.63	-0.1
3,569,535	-		PS417_16290	0.63	-0.2
3,569,535	-		PS417_16290	0.63	-0.7
3,569,598	+		PS417_16290	0.80	-0.9
3,569,598	+		PS417_16290	0.80	-0.3
3,569,659	+				-0.3
3,569,668	-				+1.0
3,569,674	-				+0.9
3,569,724	+				+0.8
3,569,774	+				-1.6
3,569,853	+				+2.3
3,569,856	+				-0.4
3,569,947	+		PS417_16295	0.28	-0.0
3,569,947	+		PS417_16295	0.28	+1.5
3,569,949	+		PS417_16295	0.28	+1.2
3,569,949	+		PS417_16295	0.28	-0.6
3,569,949	+		PS417_16295	0.28	+0.6
3,569,949	+		PS417_16295	0.28	+2.4
3,569,949	+		PS417_16295	0.28	-0.3
3,569,949	+		PS417_16295	0.28	+1.3
3,569,989	-		PS417_16295	0.40	-0.7
3,570,040	-				+0.7
3,570,040	-		PS417_16295	0.56	+1.3
3,570,063	-		PS417_16295	0.62	-0.8
3,570,181	-				+0.9
3,570,209	-				-0.2
3,570,312	-				-0.4
3,570,318	-				+1.0
3,570,365	-				+0.1
3,570,365	-				+0.2
3,570,383	-				+0.5
3,570,425	-				+0.3
3,570,484	+				+0.7
3,570,535	+				+0.7
3,570,535	+				-1.1
3,570,536	-				-0.1