Strain Fitness in Pseudomonas simiae WCS417 around PS417_11540

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,480,288	-		PS417_11535	0.21	+0.9
2,480,341	+		PS417_11535	0.25	+0.4
2,480,373	+		PS417_11535	0.28	+0.2
2,480,503	+		PS417_11535	0.38	-0.9
2,480,664	+		PS417_11535	0.52	+0.0
2,480,885	-		PS417_11535	0.70	-1.7
2,480,885	-		PS417_11535	0.70	+1.6
2,481,211	+				+0.1
2,481,212	-				-0.5
2,481,926	+		PS417_11540	0.83	+0.9
2,481,926	+		PS417_11540	0.83	+1.9
2,481,926	+		PS417_11540	0.83	-0.3
2,481,927	-		PS417_11540	0.83	+0.1
2,481,932	+		PS417_11540	0.84	+1.3
2,481,933	-		PS417_11540	0.84	-0.4
2,481,945	-		PS417_11540	0.85	+1.5
2,482,061	+				-0.0
2,482,061	+				-2.6
2,482,402	+		PS417_11545	0.29	-0.0
2,482,741	+		PS417_11545	0.62	-0.5
2,482,742	-		PS417_11545	0.62	+0.1
2,482,867	+		PS417_11545	0.75	-0.7