Strain Fitness in Pseudomonas simiae WCS417 around PS417_07190

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,586,698	-				-1.0
1,586,950	+				+0.1
1,586,962	+				+0.4
1,586,962	+				+0.0
1,586,963	-				+0.1
1,586,963	-				-2.3
1,587,194	+				+0.7
1,587,194	+				-0.3
1,587,194	+				-0.4
1,587,195	-				-0.3
1,587,228	+				-0.5
1,587,228	+				-2.7
1,587,229	-				-0.9
1,587,229	-				+0.8
1,587,229	-				+0.2
1,587,361	-		PS417_07190	0.13	-0.8
1,587,566	-		PS417_07190	0.29	-1.5
1,587,573	-		PS417_07190	0.30	-1.2
1,587,704	+		PS417_07190	0.41	-0.4
1,587,705	-		PS417_07190	0.41	-1.9
1,587,916	+		PS417_07190	0.58	-0.5
1,587,943	+				-0.4
1,588,389	+				+0.0
1,588,389	+				+0.4
1,588,389	+				-0.4
1,588,389	+				+0.2
1,588,390	-				-0.6
1,588,390	-				+0.6
1,588,390	-				-0.5
1,588,486	-				+0.6
1,588,486	-				+0.6
1,588,498	+				-1.6
1,588,541	+				+1.6
1,588,541	+				+1.3
1,588,541	+				+0.5
1,588,542	-				+4.6
1,588,624	+				-0.1
1,588,657	+				+0.8
1,588,660	+				-0.2
1,588,660	+				-0.4
1,588,748	+		PS417_07195	0.13	-0.6
1,588,748	+		PS417_07195	0.13	+0.5
1,588,749	-		PS417_07195	0.14	+2.3
1,588,900	+		PS417_07195	0.73	-0.4
1,588,900	+		PS417_07195	0.73	+1.7
1,588,901	-		PS417_07195	0.73	-1.1
1,588,901	-		PS417_07195	0.73	+0.8
1,588,970	+				-0.8
1,589,031	-				+0.2
1,589,078	+				-0.0
1,589,124	+		PS417_07200	0.11	-0.8
1,589,124	+		PS417_07200	0.11	-0.2
1,589,124	+		PS417_07200	0.11	-0.2
1,589,125	-		PS417_07200	0.11	-1.1
1,589,125	-		PS417_07200	0.11	-0.2
1,589,125	-		PS417_07200	0.11	+0.8
1,589,125	-		PS417_07200	0.11	+0.2