Strain Fitness in Pseudomonas simiae WCS417 around PS417_05390

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,201,523	+		PS417_05385	0.83	+0.2
1,201,524	-		PS417_05385	0.83	+0.0
1,201,524	-		PS417_05385	0.83	+0.5
1,201,667	+		PS417_05385	0.89	+1.5
1,201,667	+		PS417_05385	0.89	-0.4
1,201,667	+		PS417_05385	0.89	-0.0
1,201,668	-		PS417_05385	0.89	-0.2
1,201,668	-		PS417_05385	0.89	-0.8
1,201,718	+				+1.1
1,201,720	+				-0.8
1,201,730	+				+1.5
1,201,731	-				-0.5
1,201,733	+				-0.4
1,201,866	+				+2.1
1,202,073	+				-1.7
1,202,296	-				-0.1
1,202,449	+				+0.9
1,202,449	+				+0.0
1,202,450	-				+0.4
1,202,450	-				-0.0
1,202,450	-				-0.0
1,202,450	-				-0.4
1,202,450	-				+0.6
1,202,937	+		PS417_05390	0.19	-0.1
1,203,066	+		PS417_05390	0.21	-0.4
1,203,066	+		PS417_05390	0.21	+0.7
1,203,066	+		PS417_05390	0.21	-0.4
1,203,066	+		PS417_05390	0.21	-0.6
1,203,066	+		PS417_05390	0.21	-0.9
1,203,066	+		PS417_05390	0.21	+0.8
1,203,067	-		PS417_05390	0.21	+0.1
1,204,158	+		PS417_05390	0.43	+0.2
1,204,210	-		PS417_05390	0.44	-0.7
1,204,210	-		PS417_05390	0.44	-2.8
1,204,446	+		PS417_05390	0.48	-0.8
1,204,459	-		PS417_05390	0.49	-0.2
1,204,697	+		PS417_05390	0.53	-0.7
1,204,698	-		PS417_05390	0.53	-0.4
1,204,698	-		PS417_05390	0.53	+0.2
1,204,698	-		PS417_05390	0.53	-0.6
1,204,701	+		PS417_05390	0.53	-0.6
1,204,701	+		PS417_05390	0.53	+0.1
1,205,110	-		PS417_05390	0.61	-1.1
1,205,110	-		PS417_05390	0.61	+0.0
1,205,347	-		PS417_05390	0.66	-0.9
1,206,222	+		PS417_05390	0.83	-0.4
1,206,682	-				-0.3
1,206,780	+				+0.5
1,206,780	+				-0.4
1,206,791	+				-0.6
1,206,792	-				-0.4
1,206,792	-				+0.2
1,206,850	-				-0.1
1,207,143	+				-0.7
1,207,143	+				+1.0
1,207,143	+				+1.1
1,207,144	-				-0.2
1,207,144	-				-0.3
1,207,147	+				-0.2
1,207,148	-				-1.6
1,207,148	-				-0.2
1,207,148	-				-0.4
1,207,334	+				-1.7
1,207,335	-				+0.1
1,207,982	+		PS417_05395	0.26	+0.2
1,207,982	+		PS417_05395	0.26	-2.6
1,207,983	-		PS417_05395	0.26	+0.9
1,207,983	-		PS417_05395	0.26	+0.0
1,208,027	+		PS417_05395	0.28	+0.4