Strain Fitness in Pseudomonas simiae WCS417 around PS417_00525

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
104,964	+		PS417_00520	0.55	-0.3
105,195	+		PS417_00520	0.73	-1.1
105,195	+		PS417_00520	0.73	-0.1
105,195	+		PS417_00520	0.73	-0.5
105,195	+		PS417_00520	0.73	-0.5
105,196	-		PS417_00520	0.73	+0.9
105,196	-		PS417_00520	0.73	-0.3
105,196	-		PS417_00520	0.73	-0.1
105,196	-		PS417_00520	0.73	-0.1
105,196	-		PS417_00520	0.73	+0.5
105,342	+		PS417_00520	0.84	-0.0
105,342	+		PS417_00520	0.84	+0.3
105,343	-		PS417_00520	0.84	-0.0
105,547	+				-0.3
105,548	-				+0.8
105,553	+				-1.3
105,554	-				-0.3
105,554	-				-0.1
105,565	-				+0.5
105,690	-				+1.9
105,733	+				-0.1
105,734	-				-1.1
105,783	+				-0.4
105,783	+				-0.3
105,784	-				-0.1
105,784	-				+0.3
105,784	-				-0.7
105,784	-				-0.7
105,798	+				-1.3
105,925	+				-1.4
105,953	+				-0.4
106,265	-		PS417_00525	0.17	-0.5
106,265	-		PS417_00525	0.17	+0.6
106,493	-		PS417_00525	0.29	+0.1
106,561	-		PS417_00525	0.32	-0.8
106,648	-		PS417_00525	0.37	-1.4
106,675	+		PS417_00525	0.38	-0.7
106,675	+		PS417_00525	0.38	-0.4
106,676	-		PS417_00525	0.38	-0.9
106,687	+		PS417_00525	0.39	-0.3
106,688	-		PS417_00525	0.39	-0.5
106,688	-		PS417_00525	0.39	+1.5
106,789	+		PS417_00525	0.44	-1.4
106,789	+		PS417_00525	0.44	+1.5
106,790	-		PS417_00525	0.44	-1.6
106,790	-		PS417_00525	0.44	-1.1
106,872	+		PS417_00525	0.48	-0.4
106,872	+		PS417_00525	0.48	+0.8
106,872	+		PS417_00525	0.48	-2.2
106,873	-		PS417_00525	0.48	+0.3
106,873	-		PS417_00525	0.48	-0.5
106,895	-		PS417_00525	0.49	+1.1
107,042	-		PS417_00525	0.57	-1.6
107,110	+		PS417_00525	0.60	-2.4
107,164	+		PS417_00525	0.63	-0.6
107,164	+		PS417_00525	0.63	-1.7
107,164	+		PS417_00525	0.63	+0.7
107,164	+		PS417_00525	0.63	+0.2
107,197	+		PS417_00525	0.65	+0.4
107,198	-		PS417_00525	0.65	-0.4
107,263	+				+3.1
107,263	+		PS417_00525	0.68	-1.0
107,263	+		PS417_00525	0.68	-0.7
107,326	+		PS417_00525	0.71	-1.8
107,326	+		PS417_00525	0.71	-0.3
107,326	+		PS417_00525	0.71	-1.3
107,327	-		PS417_00525	0.72	-1.2
107,501	-		PS417_00525	0.80	-1.8
107,552	+		PS417_00525	0.83	-1.7
107,657	-		PS417_00525	0.88	+1.5
107,896	+				-1.1
108,196	+				-0.8
108,197	-				+0.1
108,197	-				-0.4
108,197	-				+0.4
108,300	-		PS417_00535	0.23	-0.5
108,300	-		PS417_00535	0.23	+0.5
108,429	-		PS417_00535	0.65	-0.6
108,514	+				-0.9
108,576	-				-0.5
108,623	+				+1.1