Strain Fitness in Pseudomonas simiae WCS417 around PS417_04525

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
998,543	-				+0.5
998,562	-				+0.8
998,608	-				-0.3
998,608	-				-1.0
998,674	+				+0.0
998,674	+				-0.1
998,675	-				-0.0
998,675	-				-1.0
998,704	+				+0.6
998,705	-				-1.2
998,705	-				-0.7
998,705	-				+0.5
999,262	+				+0.2
999,263	-				+1.5
999,335	+				-0.8
999,335	+				-2.4
999,336	-				+0.5
999,405	+				-1.2
999,405	+				-0.8
999,405	+				-1.3
999,405	+				+2.7
999,406	-				-0.9
999,406	-				-0.0
999,406	-				+1.5
999,406	-				-0.2
999,447	+				+0.7
999,448	-				-0.1
999,735	-		PS417_04525	0.22	-1.2
999,854	+		PS417_04525	0.34	-0.2
999,854	+		PS417_04525	0.34	-1.2
999,855	-		PS417_04525	0.34	-0.9
999,855	-		PS417_04525	0.34	-0.1
999,855	-		PS417_04525	0.34	-0.7
999,855	-		PS417_04525	0.34	-1.4
999,855	-		PS417_04525	0.34	-0.7
1,000,371	-		PS417_04525	0.85	+0.9
1,000,496	+				-1.4
1,000,497	-				+1.0
1,000,497	-				+0.2
1,000,715	+		PS417_04530	0.17	-0.2
1,000,715	+		PS417_04530	0.17	-1.7
1,000,715	+		PS417_04530	0.17	-0.1
1,000,724	+		PS417_04530	0.18	+1.4
1,001,140	-		PS417_04530	0.61	-0.5