Strain Fitness in Pseudomonas simiae WCS417 around PS417_27540

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,941,078	+		PS417_27535	0.88	+0.3
5,941,078	+		PS417_27535	0.88	-0.2
5,941,079	-		PS417_27535	0.88	+0.1
5,941,164	+				-0.8
5,941,206	+				+0.4
5,941,206	+				-0.0
5,941,207	-				-0.6
5,941,251	-				+0.1
5,941,290	-				-0.9
5,941,290	-				-0.7
5,941,290	-				+0.3
5,941,372	-				+0.0
5,941,391	+				+0.0
5,941,438	+				-1.5
5,941,438	+				-0.2
5,941,439	-				-0.1
5,941,452	+				-1.5
5,941,453	-				+0.3
5,941,489	+				+1.4
5,941,504	+				+0.1
5,941,505	-				+0.7
5,941,505	-				-1.1
5,941,505	-				-0.6
5,941,505	-				+0.7
5,941,569	+				-0.4
5,942,809	-		PS417_27540	0.82	-0.5
5,943,131	-				-0.3
5,943,131	-				+0.7
5,943,131	-				-0.9
5,943,131	-				+0.1
5,943,388	+				-1.0
5,943,388	+		PS417_27545	0.27	+1.0
5,943,388	+		PS417_27545	0.27	+1.5
5,943,388	+		PS417_27545	0.27	-0.2
5,943,389	-		PS417_27545	0.28	-0.0
5,943,389	-		PS417_27545	0.28	-1.5
5,943,398	-		PS417_27545	0.29	+0.1
5,943,433	+		PS417_27545	0.34	-0.1
5,943,434	-		PS417_27545	0.34	-0.4
5,943,434	-		PS417_27545	0.34	+0.6
5,943,434	-		PS417_27545	0.34	+1.1
5,943,434	-		PS417_27545	0.34	+0.4
5,943,571	+		PS417_27545	0.55	-0.7
5,943,572	-		PS417_27545	0.55	-2.3
5,943,572	-		PS417_27545	0.55	-0.2
5,943,572	-		PS417_27545	0.55	-0.3
5,943,693	-		PS417_27545	0.74	+0.9
5,943,829	+				-1.1
5,943,830	-				-0.1
5,943,830	-				-0.2
5,943,832	+				+0.5
5,943,833	-				+0.0
5,943,833	-				-0.9
5,943,833	-				+0.4
5,943,837	-				-0.5
5,943,837	-				+0.2
5,943,909	-				-2.5
5,943,910	+				+1.3
5,943,910	+				-1.6
5,943,910	+				-0.5
5,943,911	-				-0.5
5,943,911	-				+0.1
5,943,911	-				-0.3