Strain Fitness in Pseudomonas simiae WCS417 around PS417_26870

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,800,621	+				+0.8
5,801,126	+				+0.2
5,801,126	+				+0.2
5,801,127	-				-0.1
5,801,213	-		PS417_26870	0.12	-0.4
5,801,322	+		PS417_26870	0.26	+1.1
5,801,339	-		PS417_26870	0.28	-1.1
5,801,410	+		PS417_26870	0.37	+0.2
5,801,410	+		PS417_26870	0.37	-0.0
5,801,410	+		PS417_26870	0.37	+0.2
5,801,411	-		PS417_26870	0.37	-0.3
5,801,411	-		PS417_26870	0.37	-0.7
5,801,411	-		PS417_26870	0.37	-0.1
5,801,411	-		PS417_26870	0.37	-1.5
5,801,414	+		PS417_26870	0.37	-0.5
5,801,414	+		PS417_26870	0.37	+1.0
5,801,414	+		PS417_26870	0.37	-1.4
5,801,415	-		PS417_26870	0.37	+0.1
5,801,415	-		PS417_26870	0.37	+0.8
5,801,415	-		PS417_26870	0.37	+0.6
5,801,415	-		PS417_26870	0.37	-0.5
5,801,415	-		PS417_26870	0.37	-1.5
5,801,608	+		PS417_26870	0.61	+1.1
5,801,749	+				-0.5
5,801,749	+		PS417_26870	0.78	-0.5
5,801,750	-		PS417_26870	0.78	+0.4
5,801,914	-				+1.0
5,801,928	+				+0.4
5,801,929	-				+0.6
5,801,929	-				-1.3
5,801,995	+				-1.4
5,801,996	-				+0.3
5,802,014	-				+0.7
5,802,235	+		PS417_26875	0.33	-0.1
5,802,236	-		PS417_26875	0.33	-0.4
5,802,236	-		PS417_26875	0.33	+2.0
5,802,236	-		PS417_26875	0.33	+0.3
5,802,239	-		PS417_26875	0.34	+0.2
5,802,340	+		PS417_26875	0.45	-0.6
5,802,340	+		PS417_26875	0.45	+0.1
5,802,341	-		PS417_26875	0.46	+2.7
5,802,341	-		PS417_26875	0.46	-0.4
5,802,341	-		PS417_26875	0.46	+0.8
5,802,400	+		PS417_26875	0.52	+0.1
5,802,400	+		PS417_26875	0.52	-0.4
5,802,619	+		PS417_26875	0.78	-0.8
5,802,713	-		PS417_26875	0.88	-1.2
5,802,713	-		PS417_26875	0.88	+1.1
5,802,812	+				-0.4
5,802,812	+				-0.0
5,802,812	+				-1.4
5,802,812	+				-0.2
5,802,812	+				-2.4
5,802,813	-				-0.0
5,802,813	-				+0.5
5,802,813	-				-0.9
5,802,813	-				-1.6
5,802,813	-				-1.1
5,802,813	-				-0.6
5,802,817	-				-0.4
5,802,817	-				-0.7
5,802,817	-				+3.8
5,802,817	-				-0.2
5,802,843	+				+0.7
5,802,850	+				-0.3
5,802,850	+				+1.4
5,802,851	-				-0.7
5,802,852	+				-0.1
5,802,853	-				-0.3
5,802,853	-				-0.3