Strain Fitness in Pseudomonas simiae WCS417 around PS417_26770

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,781,738	+		PS417_26760	0.64	+0.1
5,781,845	+		PS417_26760	0.73	-1.8
5,781,900	+		PS417_26760	0.77	-1.4
5,782,088	-				+0.8
5,782,088	-				-2.3
5,782,180	+				+0.7
5,782,405	+		PS417_26765	0.66	-0.6
5,782,446	+		PS417_26765	0.78	-0.7
5,782,446	+		PS417_26765	0.78	-0.5
5,782,446	+		PS417_26765	0.78	+0.5
5,782,450	+		PS417_26765	0.80	+0.2
5,782,565	-				+0.4
5,782,565	-				+0.4
5,782,820	+		PS417_26770	0.22	-0.1
5,783,027	+		PS417_26770	0.51	-0.1
5,783,028	-		PS417_26770	0.51	-0.7
5,783,247	-		PS417_26770	0.81	-1.6
5,783,397	-				-0.1
5,783,397	-				-0.7
5,783,397	-				-0.1
5,783,397	-				-0.4
5,783,466	-				+0.8
5,783,466	-				-0.1
5,783,771	+		PS417_26775	0.47	-0.8
5,783,771	+				-1.3
5,783,772	-		PS417_26775	0.47	+0.5
5,783,942	+		PS417_26775	0.69	-0.7
5,783,973	-		PS417_26775	0.73	-0.9
5,784,107	+		PS417_26775	0.90	+1.5
5,784,141	-				-1.8
5,784,144	+				-0.8
5,784,144	+				+0.4
5,784,174	+				+1.2