Strain Fitness in Pseudomonas simiae WCS417 around PS417_23615

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,106,283	+				+0.9
5,106,284	-				-0.1
5,106,284	-				-1.1
5,106,480	+				-0.4
5,106,480	+				+0.2
5,106,480	+				-0.6
5,106,480	+				+0.2
5,106,480	+				+0.0
5,106,481	-				-1.9
5,106,481	-				+1.8
5,106,481	-				+1.1
5,106,530	-				+0.1
5,106,530	-				-0.2
5,106,595	+				+0.6
5,106,635	-		PS417_23610	0.18	-0.2
5,106,740	+		PS417_23610	0.46	-0.5
5,106,740	+		PS417_23610	0.46	+1.4
5,106,740	+				-0.3
5,106,811	-		PS417_23610	0.64	-0.6
5,106,815	+				+1.5
5,106,815	+		PS417_23610	0.65	+0.8
5,106,962	+				+0.5
5,107,056	+				+0.2
5,107,847	+		PS417_23615	0.54	+0.4
5,107,968	-		PS417_23615	0.62	-0.6
5,108,273	+		PS417_23615	0.83	-1.1
5,108,274	-		PS417_23615	0.83	-0.8
5,108,308	+		PS417_23615	0.86	-1.3
5,108,520	-				-0.4
5,108,540	-				+0.1
5,108,540	-				+0.6
5,108,577	+				-0.5
5,108,580	+				-1.2
5,108,580	+				-0.4
5,108,580	+				+1.5
5,108,581	-				+0.9
5,108,581	-				-0.0
5,108,581	-				-0.4
5,108,581	-				-0.2
5,108,587	+				-0.7
5,108,588	-				+0.0
5,108,702	-				-0.1
5,108,749	+				+0.2
5,108,750	-				-0.1
5,108,750	-				-0.4
5,108,820	+		PS417_23620	0.12	+0.5
5,108,821	-		PS417_23620	0.12	+0.4
5,108,821	-		PS417_23620	0.12	-1.6
5,108,821	-		PS417_23620	0.12	-0.0
5,108,821	-		PS417_23620	0.12	+1.2
5,108,991	+		PS417_23620	0.31	+0.3
5,108,992	-		PS417_23620	0.31	-1.4
5,109,258	+		PS417_23620	0.61	+0.0
5,109,259	-		PS417_23620	0.61	-0.5
5,109,259	-				+0.5