Strain Fitness in Pseudomonas simiae WCS417 around PS417_23510

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,086,122	+		PS417_23495	0.47	+0.1
5,086,122	+		PS417_23495	0.47	+0.8
5,086,123	-		PS417_23495	0.47	-0.2
5,086,123	-		PS417_23495	0.47	+1.8
5,086,123	-		PS417_23495	0.47	+0.5
5,086,179	+		PS417_23495	0.57	+0.5
5,086,179	+		PS417_23495	0.57	+0.1
5,086,179	+		PS417_23495	0.57	-0.2
5,086,180	-		PS417_23495	0.57	+0.1
5,086,180	-		PS417_23495	0.57	+0.8
5,086,180	-		PS417_23495	0.57	-0.1
5,086,180	-		PS417_23495	0.57	+0.1
5,086,413	+				-0.0
5,086,413	+				+1.1
5,086,414	-				+0.2
5,086,414	-				-0.8
5,086,414	-				+0.5
5,086,478	+				+1.1
5,086,478	+		PS417_23500	0.16	-0.7
5,086,478	+		PS417_23500	0.16	-0.1
5,086,478	+		PS417_23500	0.16	+0.6
5,086,479	-		PS417_23500	0.16	-0.3
5,086,479	-		PS417_23500	0.16	-0.0
5,086,479	-		PS417_23500	0.16	-0.8
5,086,596	-		PS417_23500	0.48	-0.4
5,086,952	-		PS417_23505	0.47	-0.2
5,086,952	-		PS417_23505	0.47	+1.5
5,087,186	+		PS417_23510	0.25	-0.4
5,087,187	-		PS417_23510	0.25	+0.7
5,087,192	+		PS417_23510	0.27	+3.8
5,087,192	+		PS417_23510	0.27	+0.2