Strain Fitness in Pseudomonas simiae WCS417 around PS417_17405

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,800,834	+				+0.4
3,800,924	+				+0.6
3,800,924	+				-1.1
3,800,924	+				+3.0
3,800,924	+				+0.1
3,800,925	-				-1.3
3,800,925	-				-0.4
3,800,925	-				+0.3
3,800,925	-				-0.1
3,800,929	-				-0.5
3,800,944	+				-0.0
3,800,944	+				+0.2
3,800,978	+				-0.3
3,800,987	+				+0.7
3,800,987	+				-0.7
3,801,241	+		PS417_17400	0.32	+1.0
3,801,242	-		PS417_17400	0.32	+0.5
3,801,394	-		PS417_17400	0.58	-0.6
3,801,496	+		PS417_17400	0.76	-1.0
3,801,496	+		PS417_17400	0.76	-1.5
3,801,496	+				-1.3
3,801,497	-		PS417_17400	0.76	-0.1
3,801,557	-		PS417_17400	0.86	-1.0
3,801,811	+				-1.8
3,801,811	+				-0.2
3,801,811	+				+0.9
3,801,816	-				+0.2
3,801,816	-				+0.1
3,801,835	+				-0.1
3,801,836	-				+0.4
3,801,873	+				+0.2
3,802,220	+		PS417_17405	0.51	-0.3
3,802,272	+		PS417_17405	0.58	+1.4
3,802,303	+		PS417_17405	0.62	+0.3
3,802,605	+				-0.5
3,802,726	+				+0.7
3,802,948	-		PS417_17410	0.11	-0.4
3,803,325	-		PS417_17410	0.36	+0.1
3,803,440	+		PS417_17410	0.44	+0.0