Strain Fitness in Pseudomonas simiae WCS417 around PS417_14965

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,270,965	+		PS417_14960	0.38	-1.7
3,270,965	+		PS417_14960	0.38	-1.1
3,270,969	+		PS417_14960	0.39	-1.9
3,270,969	+		PS417_14960	0.39	-2.9
3,271,013	+		PS417_14960	0.42	-1.5
3,271,013	+		PS417_14960	0.42	-3.3
3,271,013	+		PS417_14960	0.42	-2.7
3,271,014	-		PS417_14960	0.42	-0.3
3,271,014	-		PS417_14960	0.42	-2.4
3,271,014	-		PS417_14960	0.42	-2.9
3,271,014	-		PS417_14960	0.42	-1.4
3,271,276	-		PS417_14960	0.63	-3.1
3,271,349	+		PS417_14960	0.68	-2.2
3,271,361	+		PS417_14960	0.69	-2.5
3,271,361	+		PS417_14960	0.69	-1.9
3,271,371	+		PS417_14960	0.70	-0.8
3,271,613	+				-0.5
3,271,613	+		PS417_14960	0.89	-3.1
3,271,614	-		PS417_14960	0.89	-1.8
3,271,683	-				+1.3
3,271,730	+				-0.7
3,271,730	+				-2.4
3,271,743	-				-1.6
3,271,757	+				-3.7
3,271,866	-		PS417_14965	0.16	-0.2
3,271,866	-		PS417_14965	0.16	-2.3
3,271,866	-		PS417_14965	0.16	-1.9
3,272,157	-		PS417_14965	0.57	-1.7
3,272,300	-		PS417_14965	0.77	-1.5
3,272,366	-		PS417_14965	0.86	-2.2
3,272,505	+				-1.3
3,272,505	+				-0.8
3,272,506	-				+3.5
3,272,506	-				+4.5
3,272,583	+				-0.6
3,272,620	-				+2.1
3,272,620	-				+1.1
3,272,773	+		PS417_14970	0.13	-0.5
3,273,004	+		PS417_14970	0.32	-1.2
3,273,005	-		PS417_14970	0.32	-0.0
3,273,023	-		PS417_14970	0.34	-0.0
3,273,373	+		PS417_14970	0.63	+0.2
3,273,373	+		PS417_14970	0.63	-0.3
3,273,373	+		PS417_14970	0.63	-1.6
3,273,373	+		PS417_14970	0.63	-0.8
3,273,373	+		PS417_14970	0.63	+0.1
3,273,373	+		PS417_14970	0.63	+0.1
3,273,374	-		PS417_14970	0.63	+0.1
3,273,374	-		PS417_14970	0.63	+0.7