Strain Fitness in Pseudomonas simiae WCS417 around PS417_14245

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,117,126	+		PS417_14235	0.68	-0.3
3,117,143	-		PS417_14235	0.76	+0.1
3,117,207	-				-0.6
3,117,207	-				-1.3
3,117,227	+				-0.5
3,117,228	-				+0.9
3,117,243	+				-0.5
3,117,243	+				+2.0
3,117,244	-				+0.6
3,117,244	-				-1.5
3,117,268	-				-0.2
3,117,341	+				+0.2
3,117,344	-				+0.4
3,117,353	+				-0.7
3,117,393	+				+0.7
3,117,393	+				+0.1
3,117,394	-				-0.3
3,117,394	-				+0.2
3,117,913	-		PS417_14240	0.77	+0.1
3,117,913	-		PS417_14240	0.77	-0.2
3,117,913	-		PS417_14240	0.77	+1.4
3,117,914	+		PS417_14240	0.78	-0.1
3,117,914	+		PS417_14240	0.78	-0.9
3,117,938	+				-1.1
3,118,047	+				-0.3
3,118,427	+		PS417_14245	0.57	-1.2
3,118,427	+		PS417_14245	0.57	-2.0
3,118,427	+		PS417_14245	0.57	-0.3
3,118,428	-		PS417_14245	0.57	-0.0
3,118,748	+				+1.4
3,118,748	+				+1.4
3,118,749	-				+0.2
3,118,795	+		PS417_14250	0.16	+2.7
3,118,912	+		PS417_14250	0.33	-0.4
3,118,980	+		PS417_14250	0.43	+0.1
3,118,981	-		PS417_14250	0.43	-1.3
3,118,981	-		PS417_14250	0.43	-0.5
3,118,985	-		PS417_14250	0.44	-2.1
3,118,985	-		PS417_14250	0.44	-0.2
3,118,985	-		PS417_14250	0.44	-0.4
3,119,032	+		PS417_14250	0.50	+2.7
3,119,041	+		PS417_14250	0.52	-1.8
3,119,042	-		PS417_14250	0.52	-0.4
3,119,110	+		PS417_14250	0.62	-0.6
3,119,146	-		PS417_14250	0.67	-0.3
3,119,215	+		PS417_14250	0.77	+0.2
3,119,215	+		PS417_14250	0.77	+0.6
3,119,216	-		PS417_14250	0.77	-0.1
3,119,216	-		PS417_14250	0.77	+0.6
3,119,216	-		PS417_14250	0.77	-0.6
3,119,429	-				+0.1
3,119,596	+		PS417_14255	0.25	+0.9
3,119,597	-		PS417_14255	0.25	+1.2