Strain Fitness in Pseudomonas simiae WCS417 around PS417_13590

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,992,414	+		PS417_13585	0.36	-1.1
2,992,415	-		PS417_13585	0.36	+0.2
2,992,431	+		PS417_13585	0.38	+0.3
2,992,474	+		PS417_13585	0.43	+0.5
2,992,475	-		PS417_13585	0.44	-0.9
2,992,600	+		PS417_13585	0.59	+0.3
2,992,600	+		PS417_13585	0.59	+0.7
2,992,600	+		PS417_13585	0.59	+1.3
2,992,600	+		PS417_13585	0.59	+0.4
2,992,600	+		PS417_13585	0.59	-0.1
2,992,601	-		PS417_13585	0.59	-0.4
2,992,601	-		PS417_13585	0.59	+0.2
2,992,601	-		PS417_13585	0.59	-2.7
2,992,601	-		PS417_13585	0.59	-0.9
2,992,747	+		PS417_13585	0.78	-0.5
2,992,748	-		PS417_13585	0.78	-0.9
2,992,748	-		PS417_13585	0.78	-0.7
2,992,754	+		PS417_13585	0.78	+1.0
2,992,755	-		PS417_13585	0.79	-0.2
2,992,755	-		PS417_13585	0.79	-0.1
2,992,756	+		PS417_13585	0.79	+0.5
2,992,756	+		PS417_13585	0.79	-0.2
2,993,132	+				-0.0
2,993,133	-				+0.1
2,993,133	-				-0.2
2,993,133	-				-0.1
2,993,136	+				+1.9
2,993,136	+				+0.1
2,993,136	+				-0.4
2,993,263	+				-1.2
2,993,263	+				-0.2
2,993,332	-		PS417_13590	0.15	+0.7
2,993,724	+		PS417_13590	0.44	+0.1
2,993,995	-		PS417_13590	0.64	-0.6
2,993,999	+		PS417_13590	0.64	-0.7
2,994,179	+		PS417_13590	0.77	+0.4
2,994,511	-				-0.6
2,994,572	-		PS417_13595	0.13	+0.4
2,994,615	+		PS417_13595	0.19	+0.1
2,994,681	-		PS417_13595	0.29	+1.6
2,994,681	-		PS417_13595	0.29	-0.3
2,994,723	+		PS417_13595	0.35	-0.8
2,994,724	-		PS417_13595	0.36	-0.1
2,995,139	+				+0.7
2,995,139	+				-0.7
2,995,142	+				-1.0
2,995,142	+				+1.1
2,995,329	+		PS417_13600	0.26	-2.0
2,995,355	-				-0.3
2,995,434	+		PS417_13600	0.42	-0.2
2,995,434	+		PS417_13600	0.42	-0.3
2,995,455	+		PS417_13600	0.45	-0.9