Strain Fitness in Pseudomonas simiae WCS417 around PS417_13145

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,871,701	-		PS417_13140	0.29	-1.3
2,871,701	-				-1.5
2,871,961	+		PS417_13140	0.52	-1.5
2,872,150	+		PS417_13140	0.68	-0.5
2,872,463	-				+0.0
2,872,463	-				+0.1
2,872,463	-				+0.1
2,872,466	+				+0.0
2,872,466	+				-0.2
2,872,563	+				+0.5
2,872,563	+				-1.1
2,872,564	-				-0.5
2,872,750	+		PS417_13145	0.41	-0.7
2,872,757	-		PS417_13145	0.42	-0.9
2,872,811	-		PS417_13145	0.54	-1.2
2,873,013	+				-0.4
2,873,054	-				+0.1
2,873,736	-				+0.1
2,873,917	+		PS417_13155	0.10	-1.4
2,873,917	+		PS417_13155	0.10	+0.2
2,873,917	+		PS417_13155	0.10	-0.1
2,873,918	-		PS417_13155	0.11	+0.0
2,873,918	-		PS417_13155	0.11	+1.1
2,873,918	-		PS417_13155	0.11	+0.0
2,873,965	+		PS417_13155	0.14	+0.2
2,873,965	+		PS417_13155	0.14	+0.8