Strain Fitness in Pseudomonas simiae WCS417 around PS417_11005

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,357,314	-		PS417_11000	0.59	+1.1
2,357,327	+		PS417_11000	0.60	-2.3
2,357,701	+				+1.0
2,357,702	-		PS417_11000	0.82	-0.1
2,357,702	-		PS417_11000	0.82	+0.4
2,358,232	-				-0.9
2,358,232	-				-0.5
2,358,395	-		PS417_11005	0.14	-0.4
2,358,526	+		PS417_11005	0.24	-1.1
2,358,584	-		PS417_11005	0.28	+0.1
2,358,586	+		PS417_11005	0.28	-1.0
2,358,586	+		PS417_11005	0.28	-0.2
2,358,654	+		PS417_11005	0.33	+0.2
2,358,790	+		PS417_11005	0.44	+0.2
2,358,953	-		PS417_11005	0.56	+0.5
2,358,977	-		PS417_11005	0.58	-0.9
2,359,060	+		PS417_11005	0.64	-0.9
2,359,062	+		PS417_11005	0.64	-1.1
2,359,343	-		PS417_11005	0.86	-0.3
2,359,378	+		PS417_11005	0.88	-0.6
2,359,379	-		PS417_11005	0.88	-1.6
2,359,379	-		PS417_11005	0.88	+0.0
2,359,379	-		PS417_11005	0.88	-0.3
2,359,527	+				-0.6
2,359,527	+				-0.8
2,359,527	+				+0.8
2,359,528	-				-1.2
2,359,531	+				+0.6
2,359,571	+				-0.2
2,359,572	-				-1.2
2,359,572	-				+0.0
2,359,792	-		PS417_11010	0.25	+0.6
2,359,963	+		PS417_11010	0.42	-0.7
2,359,963	+		PS417_11010	0.42	-0.7
2,360,149	+		PS417_11010	0.61	-0.2
2,360,155	+		PS417_11010	0.61	+1.6
2,360,156	-		PS417_11010	0.61	-0.3
2,360,302	-		PS417_11010	0.76	-0.4
2,360,330	-		PS417_11010	0.79	+0.0
2,360,372	+		PS417_11010	0.83	-0.2
2,360,373	-		PS417_11010	0.83	-0.5
2,360,373	-		PS417_11010	0.83	-0.2