Strain Fitness in Pseudomonas simiae WCS417 around PS417_10165

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,174,840	-		PS417_10155	0.75	+0.4
2,174,840	-		PS417_10155	0.75	-1.2
2,174,929	-				-0.4
2,175,113	+		PS417_10160	0.23	-0.9
2,175,114	-		PS417_10160	0.24	-0.3
2,175,114	-		PS417_10160	0.24	-0.6
2,175,114	-		PS417_10160	0.24	+0.8
2,175,117	-		PS417_10160	0.24	-1.3
2,175,135	+		PS417_10160	0.26	-0.6
2,175,135	+				-0.7
2,175,135	+		PS417_10160	0.26	-0.9
2,175,164	+		PS417_10160	0.30	-0.3
2,175,304	-		PS417_10160	0.49	+0.1
2,175,376	-		PS417_10160	0.58	+0.5
2,175,791	+		PS417_10165	0.13	-1.6
2,175,841	-		PS417_10165	0.19	-0.9
2,175,854	+		PS417_10165	0.21	-1.5
2,176,075	+		PS417_10165	0.50	+0.2
2,176,075	+		PS417_10165	0.50	-0.2
2,176,185	-		PS417_10165	0.64	-1.0
2,176,203	+		PS417_10165	0.67	-1.3
2,176,203	+		PS417_10165	0.67	+0.1
2,176,283	+		PS417_10165	0.77	-0.1
2,176,284	-		PS417_10165	0.77	-0.5
2,176,440	+				-0.6
2,176,440	+				-1.5
2,176,441	-				-2.0
2,176,470	+				-0.3
2,176,570	+				-0.5
2,176,608	+				-0.1
2,176,608	+				+0.6
2,176,608	+				-0.6
2,176,609	-				-0.0
2,176,609	-				-0.7
2,176,609	-				+0.2
2,176,614	+				+0.5
2,176,615	-				-1.2
2,176,623	+				+0.2
2,176,734	+		PS417_10170	0.11	-0.6
2,176,734	+		PS417_10170	0.11	+1.9
2,176,734	+				+1.6
2,176,988	-		PS417_10170	0.52	-0.1
2,177,132	+		PS417_10170	0.75	-1.5
2,177,133	-		PS417_10170	0.75	-0.8
2,177,170	+				+1.6
2,177,170	+		PS417_10170	0.81	+0.1
2,177,170	+		PS417_10170	0.81	-0.0
2,177,171	-		PS417_10170	0.81	+1.0
2,177,171	-		PS417_10170	0.81	+0.1
2,177,256	+				-1.3
2,177,256	+				-0.6
2,177,257	-				-0.5
2,177,303	+				-1.7
2,177,304	-				+2.0
2,177,367	+				-0.3
2,177,367	+				-0.3
2,177,370	+				-1.1
2,177,370	+				-0.2
2,177,370	+				-0.9
2,177,370	+				+1.9
2,177,370	+				-1.9
2,177,371	-				-0.4
2,177,371	-				+0.0
2,177,371	-				+0.0
2,177,371	-				-0.0
2,177,371	-				-0.7
2,177,371	-				-1.1
2,177,371	-				-1.6
2,177,386	+				+0.5
2,177,386	+				-0.2
2,177,386	+				+0.6
2,177,386	+				+3.4
2,177,387	-				-0.4
2,177,387	-				-0.9
2,177,447	+		PS417_10175	0.25	-0.8
2,177,447	+		PS417_10175	0.25	+0.6
2,177,448	-		PS417_10175	0.25	+0.6
2,177,448	-		PS417_10175	0.25	+0.3
2,177,452	+		PS417_10175	0.27	-1.1
2,177,453	-		PS417_10175	0.27	-0.2