Strain Fitness in Pseudomonas simiae WCS417 around PS417_08365

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,833,693	+				-1.3
1,833,713	+				+0.1
1,833,713	+				+0.8
1,833,713	+				+1.5
1,833,714	-				-0.0
1,833,718	+				-0.8
1,833,719	-				+0.2
1,833,719	-				+0.7
1,833,721	+				-0.5
1,833,735	-				+0.2
1,833,735	-				-1.0
1,833,737	+				-0.4
1,833,888	-				-0.0
1,833,892	-				-2.4
1,834,252	-		PS417_08360	0.79	-1.7
1,834,252	-		PS417_08360	0.79	-0.9
1,834,350	+				+0.6
1,834,425	+				-0.1
1,834,426	-				-1.8
1,834,449	+				-0.2
1,834,450	-				+0.3
1,834,450	-				-0.7
1,834,457	+				-0.1
1,834,458	-				-1.2
1,834,458	-				-1.3
1,834,613	+				-2.2
1,834,723	-		PS417_08365	0.43	-2.8
1,835,013	-				-0.1
1,835,013	-				-0.3
1,835,027	-				-0.0
1,835,033	+				-0.1
1,835,034	-				+0.1
1,835,034	-				+0.4
1,835,043	+				+0.6
1,835,043	+				+0.1
1,835,044	-				-2.5
1,835,044	-				-1.0
1,835,338	+		PS417_08370	0.25	-0.4
1,835,428	+		PS417_08370	0.30	-0.4
1,835,429	-		PS417_08370	0.30	+0.1
1,835,429	-		PS417_08370	0.30	-0.1
1,835,487	+		PS417_08370	0.34	-0.4
1,835,488	-		PS417_08370	0.34	+1.0
1,835,584	+		PS417_08370	0.39	+0.1
1,835,692	+		PS417_08370	0.46	-0.8
1,835,692	+		PS417_08370	0.46	+0.9
1,835,693	-		PS417_08370	0.46	-0.5
1,835,707	+		PS417_08370	0.46	+0.3
1,835,708	-		PS417_08370	0.46	-0.4
1,835,791	-		PS417_08370	0.51	-0.0
1,835,791	-		PS417_08370	0.51	-0.5