Strain Fitness in Pseudomonas simiae WCS417 around PS417_08360

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,832,994	+		PS417_08355	0.43	-0.4
1,832,995	-		PS417_08355	0.43	-2.0
1,832,995	-		PS417_08355	0.43	-0.1
1,833,031	+		PS417_08355	0.45	-0.7
1,833,031	+		PS417_08355	0.45	-0.1
1,833,032	-		PS417_08355	0.46	+0.4
1,833,032	-		PS417_08355	0.46	+1.0
1,833,032	-		PS417_08355	0.46	-1.2
1,833,032	-		PS417_08355	0.46	-0.4
1,833,167	-		PS417_08355	0.55	+0.1
1,833,242	+		PS417_08355	0.60	+0.2
1,833,249	+		PS417_08355	0.61	-0.6
1,833,249	+		PS417_08355	0.61	-0.6
1,833,249	+		PS417_08355	0.61	+0.2
1,833,249	+				-0.1
1,833,250	-		PS417_08355	0.61	+0.3
1,833,250	-		PS417_08355	0.61	-0.1
1,833,250	-				+3.6
1,833,573	+		PS417_08355	0.84	+0.9
1,833,585	-		PS417_08355	0.84	+0.3
1,833,585	-		PS417_08355	0.84	-0.6
1,833,693	+				-1.3
1,833,713	+				+0.1
1,833,713	+				+0.8
1,833,713	+				+1.5
1,833,714	-				-0.0
1,833,718	+				-0.8
1,833,719	-				+0.2
1,833,719	-				+0.7
1,833,721	+				-0.5
1,833,735	-				+0.2
1,833,735	-				-1.0
1,833,737	+				-0.4
1,833,888	-				-0.0
1,833,892	-				-2.4
1,834,252	-		PS417_08360	0.79	-1.7
1,834,252	-		PS417_08360	0.79	-0.9
1,834,350	+				+0.6
1,834,425	+				-0.1
1,834,426	-				-1.8
1,834,449	+				-0.2
1,834,450	-				+0.3
1,834,450	-				-0.7
1,834,457	+				-0.1
1,834,458	-				-1.2
1,834,458	-				-1.3
1,834,613	+				-2.2
1,834,723	-		PS417_08365	0.43	-2.8
1,835,013	-				-0.1
1,835,013	-				-0.3
1,835,027	-				-0.0
1,835,033	+				-0.1
1,835,034	-				+0.1
1,835,034	-				+0.4
1,835,043	+				+0.6
1,835,043	+				+0.1
1,835,044	-				-2.5
1,835,044	-				-1.0
1,835,338	+		PS417_08370	0.25	-0.4