Strain Fitness in Pseudomonas simiae WCS417 around PS417_06420

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,421,587	+		PS417_06415	0.11	-0.5
1,421,781	+		PS417_06415	0.36	-0.2
1,421,781	+		PS417_06415	0.36	-2.0
1,421,781	+		PS417_06415	0.36	-0.3
1,421,781	+		PS417_06415	0.36	-0.5
1,421,782	-		PS417_06415	0.36	-0.8
1,421,782	-		PS417_06415	0.36	+0.3
1,421,802	+		PS417_06415	0.38	-0.0
1,421,848	-		PS417_06415	0.44	-0.2
1,422,138	-		PS417_06415	0.81	-0.2
1,422,210	+				+0.7
1,422,211	-				-0.2
1,422,285	-				+0.9
1,422,285	-				-0.0
1,422,288	+				-0.1
1,422,289	-				+0.8
1,422,289	-				+0.2
1,422,335	+				-0.4
1,422,380	+				+0.5
1,422,380	+				-1.0
1,422,381	-				-0.2
1,422,428	+				+0.4
1,422,429	-				+0.2
1,422,429	-				-0.2
1,422,429	-				-0.0
1,422,508	-				+0.1
1,422,774	+		PS417_06420	0.15	+0.1
1,422,840	+		PS417_06420	0.19	-0.1
1,422,840	+		PS417_06420	0.19	+0.5
1,422,841	-		PS417_06420	0.19	-0.6
1,422,885	+		PS417_06420	0.22	+0.0
1,423,083	-		PS417_06420	0.34	-0.2
1,423,182	+		PS417_06420	0.40	+0.1
1,423,183	-		PS417_06420	0.40	-1.3
1,423,530	+		PS417_06420	0.62	-1.5
1,423,591	-		PS417_06420	0.65	+0.2
1,423,617	-		PS417_06420	0.67	-0.1
1,423,617	-		PS417_06420	0.67	+0.0
1,423,654	+		PS417_06420	0.69	+1.2
1,423,875	+		PS417_06420	0.83	-0.0
1,423,875	+		PS417_06420	0.83	+0.7
1,423,879	+		PS417_06420	0.83	+0.8
1,423,880	-		PS417_06420	0.83	-0.1
1,423,933	-				-0.0
1,424,038	-				+0.5
1,424,038	-				-0.3
1,424,079	+				-0.8
1,424,127	-				-0.0
1,424,137	-				+0.2
1,424,186	+				-2.1
1,424,186	+				+1.0
1,424,411	+		PS417_06425	0.25	+0.0
1,424,514	-		PS417_06425	0.36	-0.8
1,424,515	+		PS417_06425	0.36	-0.4
1,424,515	+		PS417_06425	0.36	-0.7
1,424,516	-		PS417_06425	0.36	-1.7
1,424,531	+		PS417_06425	0.37	+0.8
1,424,531	+		PS417_06425	0.37	-0.2
1,424,531	+				+2.3
1,424,531	+		PS417_06425	0.37	+0.7
1,424,531	+		PS417_06425	0.37	+1.5
1,424,531	+		PS417_06425	0.37	-0.6
1,424,531	+		PS417_06425	0.37	+1.2
1,424,531	+		PS417_06425	0.37	-0.2
1,424,531	+		PS417_06425	0.37	+0.3
1,424,532	-		PS417_06425	0.38	+0.4
1,424,532	-		PS417_06425	0.38	+0.5
1,424,532	-		PS417_06425	0.38	-0.3
1,424,532	-		PS417_06425	0.38	-2.3
1,424,532	-		PS417_06425	0.38	-2.0
1,424,549	+		PS417_06425	0.39	-0.0
1,424,738	+		PS417_06425	0.58	+0.3
1,424,738	+		PS417_06425	0.58	-1.4
1,424,739	-		PS417_06425	0.58	-0.6
1,424,739	-		PS417_06425	0.58	-0.3
1,424,769	+		PS417_06425	0.61	-1.0
1,424,770	-		PS417_06425	0.61	+0.9
1,424,829	-		PS417_06425	0.67	+0.1
1,424,890	+		PS417_06425	0.73	+1.9
1,425,024	-		PS417_06425	0.86	+0.7
1,425,104	+				-0.0