Strain Fitness in Pseudomonas simiae WCS417 around PS417_04200

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
939,837	+				-1.1
939,838	-				-0.4
939,936	-		PS417_04195	0.11	-0.5
940,179	-		PS417_04195	0.37	-0.3
940,179	-		PS417_04195	0.37	+0.3
940,374	+		PS417_04195	0.59	+0.2
940,404	-		PS417_04195	0.62	+1.6
940,404	-		PS417_04195	0.62	+0.1
940,470	-		PS417_04195	0.69	+0.6
940,517	+		PS417_04195	0.74	-0.4
940,707	-				-1.4
940,758	-				+1.6
940,758	-				-1.0
940,758	-				+0.6
940,758	-				+1.2
940,758	-				-0.6
940,758	-				-1.1
940,832	+				-0.9
940,832	+				-0.7
940,832	+				+0.5
940,832	+				+0.5
940,833	-				+0.6
940,833	-				-0.2
940,833	-				-0.6
940,833	-				-0.3
941,131	+		PS417_04200	0.23	+0.5
941,178	-		PS417_04200	0.26	-1.2
941,178	-		PS417_04200	0.26	+0.1
941,208	+		PS417_04200	0.28	+1.0
941,208	+		PS417_04200	0.28	+1.8
941,209	-		PS417_04200	0.28	+0.5
941,209	-		PS417_04200	0.28	+0.7
941,817	-		PS417_04200	0.70	-1.2
941,817	-		PS417_04200	0.70	+1.4
941,817	-		PS417_04200	0.70	+0.1
941,894	+		PS417_04200	0.75	+1.1
941,894	+		PS417_04200	0.75	-0.2
941,895	-		PS417_04200	0.75	+0.2
941,895	-		PS417_04200	0.75	+0.2
941,895	-		PS417_04200	0.75	-0.7
941,895	-		PS417_04200	0.75	-0.2
941,895	-		PS417_04200	0.75	+0.9
941,938	+		PS417_04200	0.78	+0.2
941,939	-		PS417_04200	0.78	+0.3
942,068	+		PS417_04200	0.87	-0.3
942,141	-				+0.1
942,215	+				+0.2
942,236	+				+1.9
942,237	-				-1.6
942,237	-				+1.6
942,237	-				-0.0
942,248	+				+0.2
942,249	-				-1.3
942,252	-				-0.1
942,252	-				+0.1
942,252	-				+0.0
942,332	+				+2.0
942,333	-				+0.8
942,341	+				+0.4
942,342	-				-0.9
942,381	-				-0.7
942,381	-				-0.6
942,422	+				-0.1
942,423	-				+0.1
942,423	-				-0.4
942,500	+		PS417_04205	0.11	+1.0
942,527	+		PS417_04205	0.13	-1.2
942,635	+		PS417_04205	0.21	+0.6
942,636	-		PS417_04205	0.21	+0.3
942,636	-		PS417_04205	0.21	+0.0
942,791	-		PS417_04205	0.32	+0.1
942,803	+		PS417_04205	0.33	+1.4
942,848	+		PS417_04205	0.36	-1.0
943,055	+		PS417_04205	0.52	+0.2
943,055	+		PS417_04205	0.52	+0.0
943,055	+		PS417_04205	0.52	+0.6
943,056	-		PS417_04205	0.52	-0.7
943,056	-		PS417_04205	0.52	-0.1
943,098	-		PS417_04205	0.55	+0.0
943,142	-		PS417_04205	0.58	-0.9
943,157	+		PS417_04205	0.59	+0.1