Strain Fitness in Pseudomonas simiae WCS417 around PS417_22940

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,969,105	+		PS417_22935	0.64	+1.4
4,969,106	-		PS417_22935	0.64	-0.2
4,969,106	-		PS417_22935	0.64	-0.1
4,969,309	+		PS417_22935	0.81	-0.2
4,969,642	+				+0.3
4,969,642	+				+0.1
4,969,642	+				-0.6
4,969,643	-				-0.8
4,969,643	-				-1.4
4,969,643	-				-0.3
4,969,643	-				-0.3
4,969,643	-				-0.2
4,969,643	-				-0.8
4,969,643	-				+1.6
4,969,643	-				-0.2
4,969,643	-				+0.1
4,969,662	-				-0.1
4,969,662	-				+2.6
4,969,690	+				-0.4
4,969,690	+				-2.4
4,969,690	+				+0.3
4,969,690	+				-0.9
4,969,691	-				-0.4
4,969,691	-				+0.6
4,969,691	-				-1.8
4,969,691	-				-2.0
4,969,691	-				-0.1
4,969,708	+				-0.4
4,969,708	+				+0.3
4,969,709	-				-0.8
4,969,709	-				+0.7
4,969,709	-				+0.6
4,969,711	-				-0.3
4,969,859	+				-0.4
4,969,859	+				-0.3
4,969,898	-				+0.5
4,969,913	+				+1.0
4,969,913	+				+1.1
4,969,914	-				+0.2
4,969,914	-				-0.4
4,970,001	-				+0.4
4,970,009	+				-0.5
4,970,009	+				-0.5
4,970,009	+				-0.5
4,970,010	-				+0.1
4,970,010	-				+0.4
4,970,010	-				-0.2
4,970,010	-				-0.6
4,970,011	+				-0.7
4,970,011	+				+2.0
4,970,012	-				+0.2
4,970,012	-				-0.1
4,970,016	-				+0.7
4,970,215	+		PS417_22940	0.24	-0.3
4,970,687	+		PS417_22940	0.60	-0.3
4,970,687	+		PS417_22940	0.60	-0.7
4,970,688	-		PS417_22940	0.60	-0.1
4,970,688	-		PS417_22940	0.60	-0.4
4,970,715	-		PS417_22940	0.62	-0.8
4,971,039	-		PS417_22940	0.87	-0.2
4,971,039	-		PS417_22940	0.87	-0.1
4,971,039	-		PS417_22940	0.87	-0.0
4,971,039	-		PS417_22940	0.87	-1.3
4,971,117	-				-1.4
4,971,117	-				+0.3
4,971,117	-				-0.4
4,971,117	-				+0.5
4,971,128	+				+0.2
4,971,128	+				+0.4
4,971,128	+				-0.2
4,971,129	-				+0.3
4,971,129	-				-0.0
4,971,129	-				-0.2
4,971,133	-				+1.6
4,971,215	+				+0.9
4,971,330	-				+0.2
4,971,963	+		PS417_22945	0.54	+1.6
4,972,081	-		PS417_22945	0.64	+0.1