Strain Fitness in Pseudomonas simiae WCS417 around PS417_21325

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
4,634,039	+		PS417_21320	0.11	-0.1
4,634,040	-				-0.7
4,634,166	-		PS417_21320	0.27	+0.8
4,634,166	-		PS417_21320	0.27	-0.5
4,634,540	+		PS417_21320	0.73	-1.4
4,634,610	+		PS417_21320	0.82	+0.6
4,634,799	+				-0.7
4,634,799	+				-1.8
4,634,800	-				-0.1
4,634,876	-				-0.3
4,634,996	+				-0.1
4,634,997	-				-1.3
4,634,997	-				+0.2
4,635,002	+				-0.4
4,635,002	+				+0.9
4,635,003	-				-2.5
4,635,329	+		PS417_21325	0.41	-0.6
4,635,330	-		PS417_21325	0.41	-1.9
4,635,330	-		PS417_21325	0.41	-0.2
4,635,330	-		PS417_21325	0.41	-3.3
4,635,330	-		PS417_21325	0.41	-2.0
4,635,467	+				+2.2
4,635,467	+		PS417_21325	0.55	+1.6
4,635,467	+		PS417_21325	0.55	-0.3
4,636,108	+		PS417_21330	0.13	-2.1
4,636,108	+		PS417_21330	0.13	-1.5
4,636,228	+		PS417_21330	0.21	-1.8
4,636,626	+		PS417_21330	0.47	-1.3
4,636,678	+				+0.9
4,636,678	+		PS417_21330	0.51	-0.5
4,636,679	-		PS417_21330	0.51	-0.5
4,636,831	+		PS417_21330	0.61	-0.2
4,636,831	+				+0.6
4,636,831	+		PS417_21330	0.61	+0.0
4,636,832	-		PS417_21330	0.61	+0.2