Strain Fitness in Pseudomonas simiae WCS417 around PS417_16830

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,669,801	+		PS417_16825	0.35	+0.2
3,669,802	-		PS417_16825	0.35	-0.0
3,669,802	-		PS417_16825	0.35	+1.2
3,669,802	-		PS417_16825	0.35	+0.3
3,669,802	-		PS417_16825	0.35	-0.6
3,669,838	+		PS417_16825	0.39	+2.2
3,670,505	+				-0.2
3,670,579	-				+0.1
3,670,605	+				-0.3
3,670,605	+				-0.6
3,670,613	+				-0.4
3,670,613	+				-0.5
3,670,625	-				-0.5
3,670,688	+				-0.4
3,670,733	+				-1.4
3,670,896	+				-0.6
3,670,906	-				-0.0
3,670,908	+		PS417_16830	0.10	-2.0
3,670,908	+		PS417_16830	0.10	-0.2
3,670,908	+		PS417_16830	0.10	+0.7
3,670,909	-		PS417_16830	0.10	-2.2
3,670,909	-		PS417_16830	0.10	+0.3
3,670,909	-		PS417_16830	0.10	-0.2
3,670,909	-		PS417_16830	0.10	-0.1
3,670,909	-		PS417_16830	0.10	-0.4
3,671,095	-		PS417_16830	0.16	-0.1
3,671,095	-		PS417_16830	0.16	-0.7
3,671,095	-		PS417_16830	0.16	-0.3
3,671,175	+		PS417_16830	0.19	-2.7
3,671,176	-		PS417_16830	0.19	-0.9
3,671,341	-		PS417_16830	0.25	-0.7
3,671,813	+		PS417_16830	0.41	-0.8
3,671,886	+		PS417_16830	0.44	-0.6
3,672,172	-		PS417_16830	0.53	+0.2
3,672,765	+		PS417_16830	0.74	-0.2
3,672,934	-				+0.8
3,673,197	-		PS417_16830	0.88	-0.0
3,673,206	+		PS417_16830	0.89	+0.5
3,673,206	+				-0.5
3,673,206	+		PS417_16830	0.89	-0.2
3,673,207	-		PS417_16830	0.89	-0.2
3,673,429	+				-0.5
3,673,485	-				-0.2
3,673,508	-				+0.1
3,673,736	+		PS417_16835	0.58	-0.1
3,673,737	-		PS417_16835	0.59	+0.3
3,674,032	+				-0.4
3,674,072	-		PS417_16840	0.12	-0.2
3,674,251	+		PS417_16840	0.22	-1.0
3,674,252	-		PS417_16840	0.22	-2.1
3,674,320	+		PS417_16840	0.26	-0.4
3,674,321	-		PS417_16840	0.26	-0.1
3,674,374	+		PS417_16840	0.30	-0.4
3,674,375	-		PS417_16840	0.30	-0.3
3,674,375	-		PS417_16840	0.30	-0.1
3,674,432	-		PS417_16840	0.33	-0.1