Strain Fitness in Pseudomonas simiae WCS417 around PS417_13605

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,995,139	+				+2.4
2,995,139	+				-0.1
2,995,142	+				-0.5
2,995,142	+				+0.8
2,995,329	+		PS417_13600	0.26	+1.1
2,995,355	-				+0.8
2,995,434	+		PS417_13600	0.42	-2.1
2,995,434	+		PS417_13600	0.42	-1.0
2,995,455	+		PS417_13600	0.45	-0.8
2,995,689	+		PS417_13600	0.82	-1.1
2,995,689	+		PS417_13600	0.82	-0.4
2,995,689	+		PS417_13600	0.82	-0.5
2,995,940	+		PS417_13605	0.17	-0.5
2,996,090	-		PS417_13605	0.35	+1.5
2,996,165	+		PS417_13605	0.45	+0.4
2,996,198	+		PS417_13605	0.49	+0.6
2,996,198	+		PS417_13605	0.49	-0.5
2,996,198	+		PS417_13605	0.49	-0.8
2,996,199	-		PS417_13605	0.49	+1.3
2,996,199	-		PS417_13605	0.49	+2.3
2,996,323	+		PS417_13605	0.64	+0.3
2,996,323	+		PS417_13605	0.64	-0.7
2,996,658	+				+1.3
2,996,659	-				+0.9
2,996,784	+		PS417_13610	0.27	-0.0
2,996,922	+		PS417_13610	0.48	+0.5
2,996,923	-		PS417_13610	0.48	+0.1
2,996,923	-		PS417_13610	0.48	+0.5
2,996,929	-		PS417_13610	0.49	+1.0
2,996,929	-		PS417_13610	0.49	+0.8
2,996,978	-		PS417_13610	0.56	-0.3
2,996,978	-		PS417_13610	0.56	+2.7
2,997,142	-		PS417_13610	0.80	+1.3