Strain Fitness in Pseudomonas simiae WCS417 around PS417_10145

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,170,461	+		PS417_10135	0.53	-0.1
2,170,462	-		PS417_10135	0.53	-0.2
2,170,768	-				+0.5
2,171,340	-		PS417_10145	0.51	-0.9
2,171,340	-		PS417_10145	0.51	-1.3
2,171,340	-		PS417_10145	0.51	-2.2
2,171,486	-				+1.3
2,171,486	-				+0.4
2,171,931	-		PS417_10150	0.14	-0.1
2,171,931	-				+0.7
2,171,964	-		PS417_10150	0.15	+1.0
2,172,040	-		PS417_10150	0.17	-1.3
2,172,040	-		PS417_10150	0.17	-1.3
2,172,200	+		PS417_10150	0.23	+1.7
2,172,200	+		PS417_10150	0.23	-0.9
2,172,311	-		PS417_10150	0.26	-0.7
2,172,319	+		PS417_10150	0.26	+0.7
2,172,319	+		PS417_10150	0.26	+0.1
2,172,323	-		PS417_10150	0.27	+0.1
2,172,382	+		PS417_10150	0.29	-1.7
2,172,401	-		PS417_10150	0.29	+1.2
2,172,466	+		PS417_10150	0.31	-0.2
2,172,467	-		PS417_10150	0.31	-0.5