Strain Fitness in Pseudomonas simiae WCS417 around PS417_09425

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,041,536	+		PS417_09420	0.41	+1.3
2,041,537	-		PS417_09420	0.41	-1.6
2,041,537	-		PS417_09420	0.41	-1.3
2,041,674	-		PS417_09420	0.56	-0.5
2,042,148	+				-0.0
2,042,293	+		PS417_09425	0.11	-2.0
2,042,293	+		PS417_09425	0.11	-1.5
2,042,293	+		PS417_09425	0.11	+0.2
2,042,293	+		PS417_09425	0.11	-0.6
2,042,294	-		PS417_09425	0.11	-1.0
2,042,530	+		PS417_09425	0.29	-1.0
2,042,532	+		PS417_09425	0.29	-1.5
2,042,532	+		PS417_09425	0.29	+0.2
2,042,532	+		PS417_09425	0.29	-1.1
2,042,532	+		PS417_09425	0.29	-0.2
2,042,532	+		PS417_09425	0.29	+0.4
2,042,532	+		PS417_09425	0.29	+0.2
2,042,533	-		PS417_09425	0.29	-0.3
2,042,533	-		PS417_09425	0.29	-0.2
2,042,533	-		PS417_09425	0.29	-0.9
2,042,533	-		PS417_09425	0.29	-1.2
2,042,533	-		PS417_09425	0.29	-0.3
2,042,533	-		PS417_09425	0.29	-0.4
2,042,562	+		PS417_09425	0.32	-1.3
2,042,691	+		PS417_09425	0.41	-1.0
2,042,692	-		PS417_09425	0.41	+0.3
2,042,756	-				-1.3
2,042,775	+		PS417_09425	0.48	-0.2
2,042,776	-		PS417_09425	0.48	+1.0
2,042,776	-		PS417_09425	0.48	-1.3
2,042,823	+		PS417_09425	0.51	+1.5
2,042,828	-		PS417_09425	0.52	-0.0
2,043,219	+		PS417_09425	0.82	-0.3
2,043,257	+		PS417_09425	0.84	+0.8
2,043,258	-		PS417_09425	0.85	+2.7
2,043,258	-		PS417_09425	0.85	+0.2
2,043,428	-				+0.1
2,043,429	+				+1.4
2,043,430	-				+0.2
2,043,430	-				+0.3
2,043,430	-				-0.9
2,043,468	-				-0.6
2,043,468	-				-0.4
2,043,551	-				-0.3
2,043,619	+				+0.3
2,043,619	+				+0.5
2,043,620	-				-0.5
2,043,620	-				-0.2
2,043,620	-				-0.2
2,043,879	-		PS417_09430	0.36	-0.3
2,044,030	+		PS417_09430	0.54	-0.1
2,044,030	+		PS417_09430	0.54	-0.3
2,044,207	+		PS417_09430	0.74	-0.3
2,044,208	-		PS417_09430	0.74	-0.3