Strain Fitness in Pseudomonas simiae WCS417 around PS417_07510

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,649,233	+		PS417_07505	0.12	+0.3
1,649,374	+		PS417_07505	0.27	-0.8
1,649,377	-		PS417_07505	0.27	+0.7
1,649,377	-		PS417_07505	0.27	-0.1
1,649,530	+		PS417_07505	0.43	-0.7
1,649,531	-		PS417_07505	0.43	+0.2
1,649,680	+		PS417_07505	0.58	-0.5
1,649,680	+		PS417_07505	0.58	+1.7
1,649,681	-		PS417_07505	0.58	+0.2
1,649,681	-		PS417_07505	0.58	+0.0
1,649,681	-		PS417_07505	0.58	+1.8
1,649,683	-		PS417_07505	0.58	+0.4
1,649,683	-				+1.7
1,650,002	+				-1.8
1,650,032	-				-1.4
1,650,179	-				+0.8
1,650,257	+				+1.1
1,650,257	+				+1.2
1,650,257	+				+1.2
1,650,257	+				+0.5
1,650,258	-				+0.9
1,650,258	-				+2.2
1,650,377	+		PS417_07510	0.19	+2.5
1,650,470	+		PS417_07510	0.29	+1.9
1,650,542	+		PS417_07510	0.37	+0.9
1,650,543	-		PS417_07510	0.37	+1.5
1,650,543	-		PS417_07510	0.37	+1.6
1,650,748	+		PS417_07510	0.59	+0.3
1,650,771	-		PS417_07510	0.61	+0.9
1,650,812	+				+1.1
1,650,992	+		PS417_07510	0.85	+1.9
1,650,992	+		PS417_07510	0.85	+0.8
1,651,160	+				+0.6
1,651,160	+				-0.3
1,651,160	+				-0.4
1,651,251	+				+1.6
1,651,251	+				-1.4
1,651,252	-				-1.0
1,651,298	-				+0.9
1,651,313	+				+0.4
1,651,325	+				-1.7
1,651,325	+				+1.6
1,651,325	+				+1.2
1,651,326	-				-0.4
1,651,352	+				-1.1
1,651,353	-				+1.7
1,651,379	+				+0.1
1,651,380	-				-0.0
1,651,380	-				-1.8
1,651,432	-				+0.2
1,651,739	+		PS417_07515	0.15	-3.3
1,651,740	-		PS417_07515	0.15	-1.2
1,651,740	-		PS417_07515	0.15	-0.2
1,651,757	+		PS417_07515	0.16	+0.4
1,651,757	+		PS417_07515	0.16	+1.2
1,651,787	+		PS417_07515	0.17	+0.1
1,651,787	+		PS417_07515	0.17	-0.9
1,651,787	+		PS417_07515	0.17	+0.7
1,651,788	-		PS417_07515	0.17	-1.9
1,651,788	-		PS417_07515	0.17	+0.3
1,651,788	-		PS417_07515	0.17	-0.7
1,651,795	-		PS417_07515	0.17	-0.5
1,651,892	+		PS417_07515	0.21	+0.1
1,651,893	-		PS417_07515	0.21	-2.3
1,651,935	-		PS417_07515	0.22	-0.1
1,652,093	+		PS417_07515	0.28	+0.0
1,652,093	+		PS417_07515	0.28	+0.9
1,652,093	+		PS417_07515	0.28	-1.2
1,652,093	+		PS417_07515	0.28	+1.8
1,652,094	-		PS417_07515	0.28	+0.7
1,652,094	-		PS417_07515	0.28	-0.5
1,652,094	-		PS417_07515	0.28	-0.1
1,652,094	-		PS417_07515	0.28	-0.5
1,652,117	+		PS417_07515	0.29	+0.2
1,652,117	+		PS417_07515	0.29	-1.1
1,652,118	-		PS417_07515	0.29	-0.0