Strain Fitness in Pseudomonas simiae WCS417 around PS417_27235

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,878,811	-		PS417_27225	0.83	-0.6
5,878,828	+		PS417_27225	0.85	+1.8
5,878,828	+		PS417_27225	0.85	-0.1
5,879,030	-		PS417_27230	0.11	-2.3
5,879,053	-		PS417_27230	0.17	+0.6
5,879,155	-		PS417_27230	0.39	+0.3
5,879,189	+		PS417_27230	0.47	-0.1
5,879,189	+		PS417_27230	0.47	-0.3
5,879,316	+		PS417_27230	0.75	-0.9
5,879,453	+				-0.4
5,879,453	+				-0.6
5,879,453	+				-1.1
5,879,453	+				+0.6
5,879,453	+				-0.2
5,879,454	-				-1.2
5,879,454	-				+0.3
5,879,454	-				+0.4
5,879,461	+				+1.4
5,879,466	+				-0.4
5,879,467	-				+0.2
5,879,467	-				-0.5
5,879,472	+				-0.9
5,879,507	+				+0.5
5,879,612	+		PS417_27235	0.37	-0.6
5,879,613	-		PS417_27235	0.37	-1.2
5,879,807	+				-0.5
5,879,808	-				+1.8
5,879,889	+				-3.1
5,879,890	-				+0.6
5,879,890	-				+0.4
5,879,893	+				-0.4
5,879,893	+				+0.8
5,879,893	+				-1.3
5,879,893	+				+0.0
5,879,893	+				-1.2
5,879,893	+				+0.1
5,879,894	-				-0.4
5,879,894	-				-2.2
5,879,894	-				-1.9
5,879,894	-				+0.2
5,879,894	-				-0.7
5,879,919	+				-0.2
5,879,963	-				+0.9
5,879,963	-				-0.7
5,880,014	-				-0.8
5,880,198	+		PS417_27240	0.30	-0.4
5,880,198	+		PS417_27240	0.30	+0.3
5,880,198	+		PS417_27240	0.30	-0.3
5,880,199	-		PS417_27240	0.30	-0.8
5,880,199	-				+0.1
5,880,199	-		PS417_27240	0.30	+0.3
5,880,232	+		PS417_27240	0.35	+0.5
5,880,279	+		PS417_27240	0.42	+0.2
5,880,335	-		PS417_27240	0.51	-2.2
5,880,335	-		PS417_27240	0.51	+0.7
5,880,336	+		PS417_27240	0.51	+0.3
5,880,337	-		PS417_27240	0.51	-0.9
5,880,337	-		PS417_27240	0.51	+0.8
5,880,343	-		PS417_27240	0.52	-0.0
5,880,370	+		PS417_27240	0.56	-1.2
5,880,371	-		PS417_27240	0.56	+0.2
5,880,469	+		PS417_27240	0.71	-0.1
5,880,476	+		PS417_27240	0.72	-2.0
5,880,476	+		PS417_27240	0.72	+0.6
5,880,476	+		PS417_27240	0.72	-1.7
5,880,535	+		PS417_27240	0.81	+1.1
5,880,536	-		PS417_27240	0.81	-0.3
5,880,536	-		PS417_27240	0.81	-1.4
5,880,536	-		PS417_27240	0.81	+0.1
5,880,740	+				-1.1
5,880,740	+				+0.1
5,880,740	+				+1.1
5,880,741	-				-0.4
5,880,741	-				+3.2
5,880,742	+				+1.5
5,880,743	-				-2.2