Strain Fitness in Pseudomonas simiae WCS417 around PS417_25650

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
5,540,415	-		PS417_25645	0.44	-1.7
5,540,641	-		PS417_25645	0.60	-1.4
5,540,667	+		PS417_25645	0.62	-2.9
5,540,670	+		PS417_25645	0.62	-1.2
5,540,687	+		PS417_25645	0.63	-2.5
5,540,687	+		PS417_25645	0.63	-2.4
5,540,732	+		PS417_25645	0.66	-1.5
5,540,732	+		PS417_25645	0.66	-1.5
5,540,733	-		PS417_25645	0.66	-1.2
5,540,916	+		PS417_25645	0.79	-1.4
5,541,042	+		PS417_25645	0.88	-4.4
5,541,222	+				+0.2
5,541,222	+				-0.9
5,541,312	+				-3.0
5,541,313	-				-3.2
5,541,313	-				-1.0
5,541,329	+		PS417_25650	0.11	-2.5
5,541,330	-		PS417_25650	0.11	-2.6
5,541,334	+		PS417_25650	0.11	-2.2
5,541,576	-		PS417_25650	0.33	-1.3
5,541,576	-		PS417_25650	0.33	-1.0
5,541,803	-		PS417_25650	0.54	-3.0
5,542,369	+				-1.2
5,542,769	-				+2.4
5,542,769	-				+0.1
5,542,823	+				-0.6
5,542,824	-				+0.8
5,542,824	-				-0.7
5,542,836	-				+0.9
5,542,900	-				-1.2
5,542,900	-				-1.6
5,542,900	-				+0.6
5,543,238	-		PS417_25660	0.33	-1.5