Strain Fitness in Pseudomonas simiae WCS417 around PS417_16565

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,618,767	+				+0.2
3,618,767	+				-0.3
3,618,768	-				+0.5
3,618,768	-				+1.3
3,618,768	-				-0.7
3,618,768	-				+0.6
3,618,768	-				-0.8
3,618,829	-		PS417_16560	0.18	+0.7
3,619,076	-		PS417_16560	0.77	+1.8
3,619,091	-		PS417_16560	0.80	+0.2
3,619,240	+				-0.1
3,619,240	+				-0.7
3,619,240	+				+0.4
3,619,280	+				+0.0
3,619,280	+				-1.7
3,619,281	-				-0.5
3,619,281	-				-0.5
3,619,281	-				-0.3
3,619,281	-				+0.4
3,619,281	-				+0.0
3,619,372	-				-0.5
3,619,372	-				-1.5
3,619,720	+		PS417_16565	0.43	-0.2
3,619,794	-		PS417_16565	0.53	-1.1
3,619,885	+		PS417_16565	0.65	-0.9
3,619,886	-		PS417_16565	0.65	-1.1
3,619,886	-		PS417_16565	0.65	-1.2
3,619,970	+		PS417_16565	0.77	-1.3
3,619,971	-		PS417_16565	0.77	-0.3
3,620,061	+		PS417_16565	0.89	-1.5
3,620,071	-				+1.1
3,620,071	-				-0.1
3,620,083	+				-1.7
3,620,084	-				-0.8
3,620,170	-				-0.0
3,620,172	+				-1.0
3,620,173	-				+0.8
3,620,173	-				+0.2
3,620,186	-				-1.2
3,620,297	-				+1.3
3,620,301	+				+0.7
3,620,327	+				-1.0
3,620,468	+				-1.6
3,620,472	+				-1.1
3,620,920	+		PS417_16570	0.22	+0.1
3,620,921	-		PS417_16570	0.22	-0.0
3,620,921	-		PS417_16570	0.22	-0.3
3,620,921	-		PS417_16570	0.22	-1.1
3,620,971	+		PS417_16570	0.26	-0.8
3,620,971	+		PS417_16570	0.26	+1.2
3,620,971	+		PS417_16570	0.26	-1.0
3,621,094	+		PS417_16570	0.35	-0.3
3,621,095	-		PS417_16570	0.35	+0.2
3,621,114	+		PS417_16570	0.36	+0.2