Strain Fitness in Pseudomonas simiae WCS417 around PS417_15995

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
3,504,599	-		PS417_15990	0.39	+0.2
3,504,599	-				-0.5
3,504,599	-		PS417_15990	0.39	+0.7
3,504,669	+		PS417_15990	0.44	+0.8
3,504,793	-				+1.7
3,504,975	+		PS417_15990	0.66	-0.0
3,505,240	-		PS417_15990	0.85	-0.5
3,505,565	+				-0.3
3,505,566	-				-0.8
3,505,787	+		PS417_15995	0.22	+0.7
3,505,788	-		PS417_15995	0.23	+0.8
3,505,788	-		PS417_15995	0.23	+0.5
3,505,789	+		PS417_15995	0.23	-0.7
3,505,789	+		PS417_15995	0.23	+0.2
3,505,790	-		PS417_15995	0.23	+1.9
3,505,790	-		PS417_15995	0.23	+1.2
3,505,790	-		PS417_15995	0.23	-0.1
3,505,893	-		PS417_15995	0.30	+1.2
3,506,196	-		PS417_15995	0.50	+0.2
3,506,495	+		PS417_15995	0.71	-2.1
3,506,638	-		PS417_15995	0.80	+0.2
3,506,682	+		PS417_15995	0.83	+0.7
3,506,684	+		PS417_15995	0.83	-1.3
3,506,685	-		PS417_15995	0.83	+1.2
3,506,685	-		PS417_15995	0.83	+0.3
3,506,865	+				+0.2
3,506,965	+				+0.3
3,506,965	+				+0.4
3,507,068	-				-0.1
3,507,085	+				-0.7
3,507,085	+				-0.0
3,507,086	-				-0.1
3,507,086	-				-0.3
3,507,096	-				+1.1
3,507,149	+				-1.4
3,507,238	-				+0.3
3,507,260	+		PS417_16000	0.12	-0.6
3,507,261	-		PS417_16000	0.12	+1.7
3,507,264	-		PS417_16000	0.13	-0.7
3,507,840	+				+0.1
3,507,841	-				-0.6
3,507,842	+				+0.0
3,507,867	+				+0.0
3,507,867	+				-1.0
3,507,868	-				+0.3