Strain Fitness in Pseudomonas simiae WCS417 around PS417_12830

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
2,807,254	+		PS417_12825	0.27	-0.1
2,807,255	-		PS417_12825	0.27	+0.1
2,807,262	+		PS417_12825	0.28	-0.0
2,807,263	-		PS417_12825	0.28	+0.0
2,807,452	+		PS417_12825	0.43	-0.4
2,807,452	+		PS417_12825	0.43	+0.6
2,807,452	+		PS417_12825	0.43	-0.1
2,807,538	+		PS417_12825	0.50	+0.1
2,807,599	+		PS417_12825	0.55	-0.1
2,807,599	+		PS417_12825	0.55	-0.3
2,807,599	+		PS417_12825	0.55	-1.1
2,808,177	+				-0.8
2,808,189	+				+0.1
2,808,223	-				-1.0
2,808,241	-				-0.5
2,808,241	-				+0.6
2,808,242	+				-0.2
2,808,514	+		PS417_12830	0.29	-1.1
2,808,514	+		PS417_12830	0.29	-1.3
2,808,514	+		PS417_12830	0.29	-0.9
2,808,515	-		PS417_12830	0.29	-1.8
2,808,833	+		PS417_12830	0.64	+0.0
2,808,834	-		PS417_12830	0.64	+0.1
2,808,834	-				+0.8
2,808,834	-		PS417_12830	0.64	-0.7
2,808,834	-		PS417_12830	0.64	-1.2
2,808,837	+		PS417_12830	0.64	+0.4
2,808,876	+		PS417_12830	0.68	-1.1
2,808,986	+		PS417_12830	0.81	+0.5
2,808,987	-		PS417_12830	0.81	-2.5
2,809,143	+				-1.6
2,809,143	+				+0.4
2,809,144	-				+0.5
2,809,201	+				-0.2
2,809,306	+		PS417_12835	0.18	-0.5
2,809,315	+		PS417_12835	0.20	+0.4
2,809,322	-		PS417_12835	0.21	-0.9
2,809,348	+		PS417_12835	0.25	+1.5
2,809,435	+		PS417_12835	0.38	-0.6
2,809,488	-		PS417_12835	0.46	-1.2
2,809,735	-		PS417_12835	0.83	-0.5
2,809,735	-		PS417_12835	0.83	+0.6
2,809,735	-		PS417_12835	0.83	-0.2
2,809,738	+		PS417_12835	0.83	-0.7
2,809,738	+				-0.2
2,809,738	+		PS417_12835	0.83	-0.1
2,809,739	-		PS417_12835	0.83	-0.1
2,809,739	-		PS417_12835	0.83	+1.9
2,810,141	+		PS417_12840	0.30	+0.9