Strain Fitness in Pseudomonas simiae WCS417 around PS417_07215

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,591,759	-		PS417_07210	0.23	-0.1
1,591,766	-		PS417_07210	0.24	-0.2
1,591,766	-				-0.9
1,591,983	+		PS417_07210	0.41	-0.1
1,592,132	+		PS417_07210	0.53	+0.8
1,592,133	-		PS417_07210	0.53	-0.6
1,592,184	+		PS417_07210	0.58	+0.4
1,592,185	-		PS417_07210	0.58	+1.4
1,592,257	+		PS417_07210	0.63	-0.3
1,592,258	-		PS417_07210	0.64	-1.1
1,592,266	+		PS417_07210	0.64	-0.3
1,592,267	-		PS417_07210	0.64	+0.5
1,592,267	-		PS417_07210	0.64	-0.2
1,592,480	-		PS417_07210	0.82	+0.9
1,592,662	+				-2.0
1,592,765	+				+0.8
1,592,766	-				-0.6
1,592,766	-				+0.3
1,592,766	-				+0.2
1,592,768	+				-0.4
1,592,768	+				-0.2
1,592,769	-				-0.9
1,592,873	+		PS417_07215	0.15	-1.1
1,593,096	-		PS417_07215	0.37	-0.5
1,593,195	-		PS417_07215	0.46	+1.3
1,593,218	+		PS417_07215	0.49	-1.5
1,593,218	+		PS417_07215	0.49	-0.7
1,593,347	+		PS417_07215	0.61	+0.2
1,593,348	-		PS417_07215	0.61	-0.7
1,593,348	-		PS417_07215	0.61	-2.5
1,593,559	+		PS417_07215	0.82	-0.1
1,593,564	-		PS417_07215	0.82	-0.9
1,593,564	-		PS417_07215	0.82	-0.6
1,593,594	+		PS417_07215	0.85	-0.4
1,593,778	+				+0.1
1,593,778	+				-0.6
1,593,814	+				-0.8
1,593,878	-				-0.6
1,593,878	-				-1.4
1,593,878	-				+1.7
1,593,950	+				+0.4
1,594,110	+		PS417_07220	0.23	+0.3
1,594,219	+		PS417_07220	0.35	+4.7
1,594,220	-		PS417_07220	0.35	+0.3
1,594,222	+		PS417_07220	0.36	+0.3
1,594,222	+		PS417_07220	0.36	-0.3
1,594,222	+		PS417_07220	0.36	+0.2
1,594,223	-		PS417_07220	0.36	+0.2
1,594,223	-		PS417_07220	0.36	+0.4
1,594,261	+		PS417_07220	0.40	+1.5
1,594,262	-				+1.7
1,594,405	+		PS417_07220	0.56	+0.7
1,594,405	+		PS417_07220	0.56	-0.3
1,594,406	-		PS417_07220	0.56	-2.5
1,594,471	+		PS417_07220	0.63	-1.0
1,594,471	+		PS417_07220	0.63	-0.2
1,594,471	+		PS417_07220	0.63	+0.1
1,594,472	-		PS417_07220	0.63	-1.4
1,594,472	-		PS417_07220	0.63	+0.0
1,594,483	+		PS417_07220	0.64	-2.3
1,594,483	+		PS417_07220	0.64	-2.3
1,594,564	-		PS417_07220	0.73	+0.6