Strain Fitness in Pseudomonas simiae WCS417 around PS417_07065

Experiment: R2A with Polymyxin B sulfate 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Polymyxin B sulfate 0.002 mg/ml
1,563,122	+		PS417_07060	0.53	-1.1
1,563,122	+		PS417_07060	0.53	+0.2
1,563,122	+		PS417_07060	0.53	+1.3
1,563,321	+		PS417_07060	0.72	+1.9
1,563,321	+		PS417_07060	0.72	-0.1
1,563,322	-		PS417_07060	0.72	+1.6
1,563,322	-				-0.6
1,563,322	-		PS417_07060	0.72	+0.2
1,563,322	-		PS417_07060	0.72	+0.4
1,563,322	-		PS417_07060	0.72	+2.2
1,563,841	-		PS417_07065	0.16	-1.1
1,563,841	-		PS417_07065	0.16	-0.6
1,563,900	+		PS417_07065	0.20	-0.6
1,564,095	+		PS417_07065	0.33	+0.6
1,564,095	+		PS417_07065	0.33	-0.2
1,564,096	-		PS417_07065	0.33	-0.9
1,564,096	-		PS417_07065	0.33	+1.0
1,564,276	-		PS417_07065	0.44	-0.5
1,564,276	-		PS417_07065	0.44	-0.8
1,564,276	-		PS417_07065	0.44	+0.6
1,564,317	-		PS417_07065	0.47	-2.0
1,564,388	-		PS417_07065	0.52	-1.1
1,564,388	-		PS417_07065	0.52	-3.3
1,564,388	-		PS417_07065	0.52	-1.5
1,565,012	+				+0.4
1,565,064	+				-0.2
1,565,064	+				-2.6
1,565,064	+				-0.8
1,565,064	+				+0.5
1,565,101	-				-1.7
1,565,110	+				-0.9
1,565,110	+				+1.7
1,565,111	-				-1.5
1,565,419	+		PS417_07070	0.66	-0.3
1,565,419	+		PS417_07070	0.66	-0.1
1,565,419	+		PS417_07070	0.66	-0.7
1,565,419	+		PS417_07070	0.66	-0.0
1,565,420	-		PS417_07070	0.66	+0.0
1,565,420	-		PS417_07070	0.66	+0.6
1,565,420	-		PS417_07070	0.66	+0.4
1,565,568	+				-0.5
1,565,568	+				-0.5
1,565,568	+				-0.0
1,565,568	+				+0.7
1,565,569	-				+1.0
1,565,569	-				+0.7
1,565,569	-				-0.6
1,565,621	+				-0.1
1,565,635	-				+0.5
1,565,635	-				-0.1
1,565,728	+				+0.1
1,565,803	-				+2.3
1,565,803	-				-0.1
1,565,916	+		PS417_07075	0.18	-0.8
1,565,946	+		PS417_07075	0.21	+0.3